关键词:甘蔗; S-腺苷甲硫氨酸合成酶; 克隆; 表达分析 Cloning and Expression of SugarcaneS-adenosylmethionine Synthetase GeneScSAM SONG Xiu-Peng1, ZHANG Bao-Qing2, HUANG Xing2, YANG Li-Tao1,2,*, LI Yang-Rui1,2,* 1Agricultural College / State Key Laboratory of Conservation and Utilization of Subtropical Agro-bioresources, Guangxi University, Nanning 530004, China
2Guangxi Academy of Agricultural Sciences / Sugarcane Research Center, Chinese Academy of Agricultural Sciences / Key Laboratory of Sugarcane Biotechnology and Genetic Improvement (Guangxi), Ministry of Agriculture / Guangxi Key Laboratory of Sugarcane Genetic Improvement, Nanning 530007, China
Fund: AbstractThe full-length sequence cDNA ofScSAM (GenBank accession number: KC172558) was cloned from sugarcane variety ROC 22 using RT-PCR combined with RACE techniques. This sequence consists of 1466 bp with an intact open reading frame of 1191 bp, encoding a polypeptide of 396 amino acids. Homology analysis showed that the deduced ScSAM protein was highly homologous to SAM proteins from different species. Phylogenetic analysis indicated thatScSAM was closely related to theSAM of sorghum. Real-time PCR results showed that theScSAM gene constitutively expressed in plant, with different expression levels in root, stalk and leaf. The transcript ofScSAMin root was the highest among the three organs, which was 3.6 times higher than that in leaf. Furthermore,ScSAM transcription was induced by biotic (smut infection) and abiotic (low temperature, PEG and NaCl) stresses, but the expression patterns were different. Under oxidative stress (H2O2), the expression ofScSAM was inhibited. We suggested thatScSAM might participate in smut-resistant activities in sugarcane, and also play a role in sugarcane resistances to chill, drought, salt and oxidation stresses.
Keyword:Sugarcane; S-adenosylmethionine synthetase (SAM); Clone; Expression analysis Show Figures Show Figures
图3 ScSAM编码区核苷酸序列及推导出的氨基酸序列起始密码子ATG和终止密码子TAA用下画线表示, S-腺苷甲硫氨酸合成酶特征序列为灰色。Fig. 3 Nucleotide and predicted amino acid sequences of ScSAMThe start codon (ATG) and stop codon (TAA) are underlined. The characteristic sequence of SAM is shaded by grey.
图5 ScSAM与其他植物SAM氨基酸序列的系统进化树各节点处数值表示BootStrap值(重复1000次)。Fig. 5 Phylogentic relationship of amino acid sequences between ScSAM and other SAM proteinsThe numbers next to the nodes give BootStrap values of 1000 replicates.
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