田志喜
职称：研究员

职务：

联系电话：86-(O); 86-(L)

传真：86-

附件：
E-mail：

实验室主页：http://tianlab.genetics.ac.cn/

研究方向：大豆功能基因组


田志喜，博士，研究员，博士生导师

　　1997年获河北农业大学学士学位，2000获河北农业大学硕士学位，2007年获中国科学院遗传发育所博士学位。2007-2010年美国普渡大学博士后，2010-2011年普渡大学Research Geneticist。2012年入选中科院“****”，终期评估优秀。2012年度获“国家优秀青年基金”资助，2015年度获“国家****基金”资助。2012年获得“中国科学青年之星金奖”，2016年获得“第十四届中国青年科技奖”，2017年获得“中青年科技创新领军人才”，2017年获得第三批国家“****”领军人才。
研究方向：大豆功能基因组
大豆 (Glycinemax) 原产中国，由祖先野生大豆 (Glycinesoja) 长期定向选择、改良驯化而成。大豆是重要的粮食和油料作物，在我国已有5000多年的栽培历史。目前，中国已由大豆原产国和产豆大国转变为世界上最大的大豆进口国，大豆危机已经影响到我国的粮食安全。
我们课题组主要研究方向为大豆功能基因组研究，利用基因组学、分子遗传学、系统进化生物学等多组学联合的分析方法，对影响大豆产量、品质等重要农艺性状的网络调控系统进行解析，揭示调控大豆器官发生、种子发育、植株形态建成以及品质形成的内在机制，并致力于培育高产优质大豆新品种，为提升我国大豆生产能力做贡献。


博士后和客座研究生招聘信息
本实验室常年招生博士后和客座研究生，欢迎对大豆研究感兴趣、有志综合利用基因组学和功能组学解析重要农艺性状调控网络机理，并为我国大豆事业做贡献的优秀科研青年申请。
欢迎各高校和研究单位同学报考本实验室博士。
Research Articles
(*Co-first author; **Corresponding author)
1.Lu S*, Dong L*, Fang C*, Liu S*, Kong L*, Cheng Q*, Chen L*, Su T, Nan H, Zhang D, Zhang L, Wang Z, Yang Y, Yu D, Liu X, Yang Q, Lin X, Tang Y, Zhao X, Yang X, Tian C, Xie Q, Li X, Yuan X**, Tian Z**, Liu B**, Weller J**, and Kong F**. 2020. Stepwise selection on homeologous PRR genes controlling flowering and maturity during soybean domestication. Nat Genet 52:428-436.
2.Fang Y, Liu S, Dong Q, Zhang K, Tian Z, Li X, Li W, Qi Z, Wang Y, Tian X, Song J, Wang J, Yang C, Jiang S, Li WX, Ning H. 2020. Linkage analysis and multi-locus genome-wide association studies identify QTNs controlling soybean plant height. Front Plant Sci. 11:9.
3.Shen Y*, Du H*, Liu Y, Ni L, Wang Z, Liang C**, and Tian Z**. 2019. Update soybean Zhonghuang 13 genome to a golden reference. Sci China Life Sci 62:1257-1260.
4.Dong X*, Wang Z*, Tian L, Zhang Y, Qi D, Huo H, Xu Ji, Li Z, Liao R, Shi M, Wahocho S-A, Liu C, Zhang S, Tian Z**, and Cao Y**. 2019. De novo assembly of a wild pear (Pyrus betuleafolia) genome. Plant Biotechnol J 1:1-15.
5.Liu W*, Chen L*, Zhang S*, Hu F, Wang Z, Lyu J, Wang B, Xiang H, Zhao R, Tian Z**, Ge S**, and Wang W**. 2019. Decrease of gene expression diversity during domestication of animals and plants. BMC Evol Biol 19:19.
6.Zhang K*, Liu S*, Li W, Liu S, Li X, Fang Y, Zhang J, Wang Y, Xu S, Zhang J, Song J, Qi Z, Tian X, Tian Z, Li W**, and Ning H**. 2018. Identification of QTNs controlling seed protein content in soybean using multi-locus genome-wide association studies. Front Plant Sci 9:1690.
7.Wang M*, Li W*, Fang C*, Xu F*, Liu Y*, Wang Z, Yang R, Zhang M, Liu S, Lu S, Lin T, Tang J, Wang Y, Wang H, Lin H, Zhu B, Chen M, Kong F, Liu B, Zeng D, Jackson S**, Chu C**, and Tian Z**. 2018. Parallel domestication selection of a dormancy gene in crops from multiple families. Nat Genet 50:1435-1441.
8.Shen Y, Zhang J, Liu Y, Liu S, Liu Z, Duan Z, Wang Z, Zhu B, Guo YL, and Tian Z**. 2018. DNA methylation footprints during soybean domestication and improvement. Genome Biol 19:128.
9.Shen Y, Liu J, Geng H, Zhang J, Liu Y, Zhang H, Xing S, Du J**, Ma S**, and Tian Z**. 2018. De novo assembly of a Chinese soybean genome. Sci China Life Sci 61:871-884.
10.Xu R*, Duan P, Yu H, Zhou Z, Zhang B, Wang R, Li J, Zhang G, Zhuang S, Lyu J, Li N, Chai T, Tian Z, Yao S, and Li Y**. 2018. Control of grain size and weight by the OsMKKK10-OsMKK4-OsMAPK6 signaling pathway in rice. Mol Plant 11:860-873.
11.Zhang D*, Sun L*, Li S*, Wang W*, Ding Y, Swarm S, Li L, Wang X, Tang X, Zhang Z, Tian Z, J. Brown P, Cai C, Nelson R, and Ma J**. 2018. Elevation of soybean seed oil content through selection for seed coat shininess. Nat Plants 4:30-35.
12.Fang C*, Ma Y*, Wu S*, Liu Z, Wang Z, Yang R, Hu G, Zhou Z, Yu H, Zhang M, Pan Y, Zhou G, Ren H, Du W, Yan H, Wang Y, Han D, Shen Y, Liu S, Liu T, Zhang J, Qin H, Yuan J, Yuan X, Kong F, Liu B, Li J, Zhang Z**, Wang G**, Zhu B**, and Tian Z**. 2017. Genome-wide association studies dissect the genetic networks underlying agronomical traits in soybean. Genome Biol 18:161.
13.Lu S*, Zhao X*, Hu Y, * Liu S*, Nan H, Li X, Fang C, Cao D, Shi X, Kong L, Su T, Zhang F, Li S, Wang Z, Yuan X,. Cober E, Weller J, Liu B, Hou X**, Tian Z**, and Kong F**. 2017. Natural variation at the soybean J locus improves adaptation to the tropics and enhances yield. Nat Genet 49:773-779.
14.Zeng D*, Tian Z*, Rao Y, Dong G, Yang Y, Huang L, Leng Y, Xu J, Sun C, Zhang G, Hu J, Zhu L, Gao Z, Hu X, Guo L, Xiong G, Wang Y, Li J**, and Qian Q**. 2017. Rational design of high-yield and superior-quality rice. Nat Plants 3:17031.
15.Zou Y*, Hou X*, Wu Q, Chen J, Li Z, Han T, Niu X, Yang L, Xu Y, Zhang J, Zhang F, Tan D, Tian Z, Gu H, and Guo Y**. 2017. Adaptation of Arabidopsis thaliana to the Yangtze River basin. Genome Biol 18:239.
16.Chu S*, Wang J*, Zhu Y*, Liu S, Zhou X, Zhang H, Wang C, Yang W, Tian Z, Cheng H, and Yu D**. 2017. A R2R3-type MYB transcription factor GmMYB29 regulates iso？avonoid biosynthesis in soybean. PLoS Genet 13: e**.
17.Cao K*, Zhou Z*, Wang Q, Guo J, Zhao P, Zhu G, Fang W, Chen C, Wang X, Wang X, Tian Z**, and Wang L**. 2016. Genome-wide association study of 12 agronomic traits in peach. Nat Commun 7:13246.
18.Li Q, Fang C, Duan Z, Liu Y, Qin H, Zhang J, Sun P, Li W, Wang G, and Tian Z**. 2016. Functional conservation and divergence of GmCHLI genes in polyploid soybean. Plant J 88: 584-596.
19.Takeshima R, Hayashi T, Zhu J, Zhao C, Xu M, Yamaguchi N, Sayama T, Ishimoto M, Kong L, Shi X, Liu B, Tian Z, Yamada T, Kong F**, and Abe J**. 2016. A soybean quantitative trait locus that promotes flowering under long days is identified as FT5a, a FLOWERING LOCUS T ortholog. J Exp Bot 67:5247-5258.
20.Fang C, Ma Y, Yuan L, Wang Z, Yang Y, Zhou Z, Liu T, and Tian Z**. 2016. Chloroplasts DNA underwent independent selection from nuclear genes during soybean domestication and improvement. J Genet Genomics 43:217-221.
21.Liu T, Fang C, Ma Y, Shen Y, Li C, Li Q, Wang M, Liu S, Zhang J, Zhou Z, Yang R, Wang Z, and Tian Z**. 2016. Global investigation of the coevolution of MIRNA genes and microRNA targets during soybean domestication. Plant J 85:396-409.
22.Wang Z, and Tian Z**. 2015. Genomics progress will facilitate molecular breeding in soybean. Sci China Life Sci 58:813-815.
23.Zhou Z*, Jiang Y*, Wang Z*, Gou Z*, Lyu J*, Li W*, Yu Y, Shu L, ZhaoY, Ma Y, Fang C, Shen Y, Liu T, Li C, Li Q, Wu M, Wang M, Wu Y, Dong Y, Wan W, Wang X, Ding Z, Gao Y, Xiang H, Zhu B, Lee SH, Wang W**, and Tian Z**. 2015. Resequencing 302 wild and cultivated accessions identifies genes related to domestication and improvement in soybean. Nat Biotechnol 33:408-414.
24.Wang Z*, Zhou Z*, Liu Y*, Liu T, Li Q, Ji Y, Li C, Fang C, Wang M, Wu M, Shen Y, Tang T**, Ma J**, and Tian Z**. 2015. Functional evolution of phosphatidylethanolamine-binding proteins in soybean and Arabidopsis. Plant Cell 27: 323-336.
25.Yang K*, Tian Z*, Chen C*, Luo L*, Zhao B, Wang Z, Yu L, Li Y, Sun Y, Li W, Chen Y, Li Y, Zhang Y, Ai D, Zhao J, Shang C, Ma Y, Wu B, Wang M, Gao L, Sun D, Zhang P, Guo F, Wang W, Li Y, Wang J, Varshney RK**, Wang J**, Ling HQ**, and Wan P**. 2015. Genome sequencing of adzuki bean (Vigna angularis) provides insight into high starch and low fat accumulation and domestication. Proc Natl Acad Sci USA. 112:13213-13218.
26.Bai C*, Guo P*, Zhao Q, Lv Z, Zhang S, Gao F, Gao L, Wang Y, Tian Z, Wang J, Yang F, and Liu C**. 2015. Protomer roles in chloroplast chaperonin assembly and function. Mol Plant 8:1478-1492.
27.Shen Y*, Zhou Z*, Wang Z, Li W, Fang C, Wu M, Ma Y, Liu T, Kong LA, Peng DL, and Tian Z**. 2014. Global dissection of alternative splicing in paleopolyploid soybean. Plant Cell 26: 996-1008.
28.Fang C*, Li C*, Li W, Wang Z, Zhou Z, Shen Y, Wu M, Wu Y, Li G, Kong LA, Liu C, Jackson SA**, and Tian Z**. 2014. Concerted evolution of D1 and D2 to regulate chlorophyll degradation in soybean. Plant J 77:700-712.
29.Zhang F*, ShenY*, Sun S*, Guo J*, Li C, Wu C, Li Q, Nian H, Huang X**, Tian Z**, and Han T**. 2014. Genome-wide gene expression analysis in a dwarf soybean mutant. Plant Genet Resour 12:S70-S73.
30.Ping J*, Liu Y*, Sun L*, Zhao M, Li Y, She M, Sui Y, Lin F, Liu X, Tang Z, Nguyen H, Tian Z, Qiu L, Nelson RL, Clemente T, Specht J, and Ma J**. 2014. Dt2 is a gain-of-function MADS-domain factor gene that specifies semideterminacy in soybean. Plant Cell 26:2831-2842.
31.Zhou Z*, Wang Z*, Li W*, Fang C, Shen Y, Li C, Wu Y, and Tian Z**. 2013. Comprehensive analyses of microRNA genes evolution in paleopolyploid soybean genome. Plant J 76:332-344.
32.Fang C, Li W, Li G, Wang Z, Zhou Z, Ma Y, Shen Y, Li C, Wu Y, Zhu B, Yang W, and Tian Z**. 2013. Cloning of Ln gene through combined approach of map-based cloning and association study in soybean. J Genet Genomics 40:93-96.
Reviews
1.Liu S, Zhang M, Feng F, Tian Z**. 2020. Toward a ‘green revolution’ in soybean. Mol Plant (in press)
2.Chen E, Huang X, Tian Z, Wing RA, and Han B. 2019. The genomics of Oryza species provides insights into rice domestication and heterosis. Annu Rev Plant Biol 70:639-665.
3.梁翰文, 吕慧颖, 葛毅强, 魏珣, 邓向东, 杨维才, 田志喜**. 2018. 作物育种关键技术发展态势. 植物遗传资源学报 3: 390-398.
4.吕慧颖, 王道文, 葛毅强, 魏珣, 邓向东, 杨维才, 田志喜**. 2018. 大豆育种行业创新动态. 植物遗传资源学报 3: 464-467.
5.田志喜**, 刘宝辉, 杨艳萍, 李明, 姚远, 任小波, 薛勇彪. 2018. 我国大豆分子设计育种成果与展望. 中国科学院院刊9: 915-922.
6.薛勇彪**, 种康, 韩斌, 桂建芳, 王台, 傅向东, 何祖华, 储成才, 田志喜, 程祝宽, 林少扬. 2015. 开启中国设计育种新篇章——“分子模块设计育种创新体系”战略性先导科技专项进展. 中国科学院院刊3: 393-402.