Construction and Utilization of Database for Chinese Maize Varieties and Their Genealogy
LI JianXin,1, XI MengHui2, ZHANG JiaWei1, XI MengJuan3, TIAN Ding4, LU YiZhe1, CHEN XiaoYang1, LI WeiHua1, ZHANG XueHai,1, TANG JiHua11College of Agronomy, Henan Agricultural University/National Key Laboratory of Wheat and Maize Crop Science, Zhengzhou 450002 2School of Chemistry and Chemical Engineering, Nanyang Normal University, Nanyang 473061, Henan 3School of Management, Xinxiang Medical University, Xinxiang 450003, Henan 4Sino-Germany College, Zhengzhou Institute of Technology, Zhengzhou 450000
Abstract 【Objective】 The breeding and popularization of new varieties are important for promoting the continuous improvement of maize yield in China. Breeding elite inbred lines is the prerequisite for strong heterotic combinations. To determine the kinship and genealogy relationship among maize inbred lines is the important basis for improvement of maize inbred, classification of heterotic groups and cross combination. It is imperative to sort out the genealogy of existing varieties and construct the corresponding genealogy database, so as to solve unclear consanguinity and inconvenient inquiry of maize inbred lines in China. 【Method】 A network MySQL database (https://www.maizedata.cn) of Chinese maize inbred lines, varieties and their genealogies was built based on the LNMP (Linux system, Nginx server software, MySQL database management system and PHP hypertext preprocessing software) server environment configuration. In addition, information of inbred lines and approval information of maize varieties in past years from the websites of Ministry of Agriculture and Rural Affairs of the People's Republic of China, Provincial Agricultural and Rural Affairs Departments, the big data platform of China’s seeds, as well as related literature and books were collected, collated and imported into MySQL database. Then, dream-weaving content management system (DedeCMS) was used to manage and update MySQL database. Query requests were submitted through AJAX (Asynchronous Javascript and XML) asynchronous processing, and the extracted inbred line and variety information were processed by PHP. Finally, the detailed genealogy information and genealogy tree were returned and displayed on the front-end web pages. In addition, phpMyAdmin software was applied to optimize the database structure and add new functions. 【Result】 In this database, more than 10 000 maize varieties that examined and approved by the provincial level or above, and their parents were collected, including 1218 inbred lines and 7823 varieties that have 1 to 10 pieces of information with different approved numbers and across eras in China. Variety information retrieval, genealogy tracing, filial generation query and customized query are the core functions of the database. Additionally, functions, such as addition, modification and deletion of maize inbred lines and variety pedigree information, haven been also integrated in the database. 【Conclusion】 Based on the LNMP server environment configuration, a database for Chinese maize varieties and their genealogies was constructed, which covers more than 10 000 maize varieties, including 1218 inbred lines and 7823 varieties. Core functions contain variety information retrieval, genealogy tracing, filial generation query, customized query, data uploading and updating. As an effective tool for Chinese maize breeders and researchers to quickly search the information and pedigree of maize inbred and varieties, the database can promote the breeding of elite maize inbred lines. Keywords：maize;inbred line;variety;genealogy;database
PDF (572KB)元数据多维度评价相关文章导出EndNote|Ris|Bibtex收藏本文 本文引用格式 李建新, 席蒙慧, 张嘉玮, 席蒙娟, 田丁, 鲁懿哲, 陈晓阳, 李卫华, 张雪海, 汤继华. 中国玉米品种及其亲本系谱数据库的创建与利用[J]. 中国农业科学, 2020, 53(16): 3404-3411 doi:10.3864/j.issn.0578-1752.2020.16.017 LI JianXin, XI MengHui, ZHANG JiaWei, XI MengJuan, TIAN Ding, LU YiZhe, CHEN XiaoYang, LI WeiHua, ZHANG XueHai, TANG JiHua. Construction and Utilization of Database for Chinese Maize Varieties and Their Genealogy[J]. Scientia Acricultura Sinica, 2020, 53(16): 3404-3411 doi:10.3864/j.issn.0578-1752.2020.16.017
在服务器上运行织梦内容管理系统（DedeCMS）,用于数据库管理、网站制作及对数据库进行快速操作[35]。系谱树的实现通过AJAX（Asynchronous Javascript And XML）异步请求方式向服务器提交查询请求,经PHP处理后从数据库提取相关自交系及品种信息,并将处理后的信息以详细信息及系谱树返回给网页前端展现给用户（图1和图2）。
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,1, 席蒙慧2, 张嘉玮1, 席蒙娟3, 田丁4, 鲁懿哲1, 陈晓阳1, 李卫华1, 张雪海
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