基本信息：
张俊鹏，男，1987年4月，副教授，工学硕士，硕导，大理大学第九批中青年学术带头人，主要研究方向：生物信息学，数据挖掘。E-mail：zhangjunpeng_411@yahoo.com
学术主页：
GitHub: https://zhangjunpeng411.github.io/
ResearchGate: https://www.researchgate.net/profile/Junpeng_Zhang3
Google Scholar:https://scholar.google.com.au/citations?hl=en&user=u5wIFyoAAAAJ
ORCID: http://orcid.org/0000-0001-6127-9701
教育经历：
n2005.09-2009.07: 昆明理工大学生物医学工程专业，获工学学士学位
n2009.09-2012.07: 昆明理工大学控制理论与控制工程，获工学硕士学位
n2019.09-至今：电子科技大学电子与信息，博士在读
工作经历：
n2012.08-至今: 大理大学专任教师
主持科研项目：
n国家自然科学基金地区项目，**，泛癌关联的ncRNA协同调控网络与模块识别的生物信息学方法研究，2020/01-2023/12，36万元，在研，主持。
n国家自然科学基金青年项目，**，癌症miRNA海绵因果网络与模块识别及其功能特性研究，2018/1-2020/12，25万元，在研，主持。
n云南省应用基础研究计划面上项目，融合单细胞转录组数据的miRNA调控网络与功能模块识别研究，2020/6-2023/5，10万元，在研，主持。
n云南省应用基础研究计划面上项目，2017FB099，复杂疾病关联的miRNA海绵及其互作网络识别的生物信息学融合方法研究，2017/6-2020/5，10万元，已结题，主持。
n大理大学第九批中青年学术带头人后备人才项目，2018/1-2021/12，3万元，在研，主持。
n云南省应用基础研究计划青年项目，2013FD038，基于异构数据的microRNA和TF因果调控网络识别，2013/10-2016/9，6万元，已结题，主持。
n大理大学青年教师科研基金项目，KYQN201203，基于LDA主题模型的功能性miRNA-mRNA调控模块识别，2013/1-2014/12，0.5万元，已结题，主持。
n昆明理工大学开放课题，，《云南省面向东南亚、南亚国家农业农村适用技术转移服务平台建设》项目开放子课题：数据采集与分析，2015/12-2016/11，2万元，已结题，主持。
n云南省教育厅科学研究基金项目，2011J079，基于概率话题模型的功能性TF-miRNA-mRNA调控模块挖掘，2011/10-2013/9，0.5万元，已结题，主持。
主要发表论文（#为共同第一作者，*为通讯作者）、专利和软件开发：
nJunpeng Zhang, Taosheng Xu, Lin Liu, Wu Zhang, Chunwen Zhao, Sijing Li, Jiuyong Li, Nini Rao, Thuc Duy Le. LMSM: a modular approach for identifying lncRNA related miRNA sponge modules in breast cancer. PLoS Computational Biology, 2020, 16(4):e**.
nGuangbin Wang, Nini Rao, Junpeng Zhang, Wei Zeng, Fengbiao Guo, Ke Liu. miRReg: a framework for studying miRNA regulation in tetralogy of fallot. IEEE Access, 2020, 8:103454-103461.
nJunpeng Zhang, Thuc Duy Le, Lin Liu, Jiuyong Li.Inferring and analyzing module-specific lncRNA-mRNA causal regulatory networks in human cancer. Briefings in Bioinformatics, 2019, 20(4): 1403-1419.
nJunpeng Zhang^#, Vu Viet Hoang Pham^#, Lin Liu, Taosheng Xu, Buu Truong, Jiuyong Li, Nini Rao, Thuc Duy Le. Identifying miRNA synergism using multiple-intervention causal inference. BMC Bioinformatics, 2019, 20(Suppl 23):613.
nJunpeng Zhang, Lin Liu, Taosheng Xu, Yong Xie, Chunwen Zhao, Jiuyong Li, Thuc Duy Le. miRspongeR: an R/Bioconductor package for the identification and analysis of miRNA sponge interaction networks and modules. BMC Bioinformatics, 2019, 20:235.
nVu Viet Hoang Pham^#, Junpeng Zhang^#, Lin Liu, Buu Truong, Taosheng Xu, Trung Tin Nguyen, Jiuyong Li, Thuc Duy Le. Identifying miRNA-mRNA regulatory relationships in breast cancer with invariant causal prediction. BMC Bioinformatics, 2019, 20:143.
nWeili Jiang, Zhenhua Chen, Yan Xiang, Dangguo Shao, Lei Ma^*, Junpeng Zhang^*. SSEM: a novel self-adaptive stacking ensemble model for classification. IEEE Access, 2019, 7(1): 120337-120349.
nPeter Brown, RELISH Consortium(One of co-authors), Yaoqi Zhou. Large expert-curated database for benchmarking document similarity detection in biomedical literature search. Database,2019, 2019: baz085, DOI:10.1093/database/baz085.
nSarvenaz Choobdar, Mehmet E. Ahsen, Jake Crawford, Mattia Tomasoni, Tao Fang, David Lamparter, Junyuan Lin, Benjamin Hescott, Xiaozhe Hu, Johnathan Mercer, Ted Natoli, Rajiv Narayan, The DREAM Module Identification Challenge Consortium(One of co-authors), Aravind Subramanian, Jitao D. Zhang, Gustavo Stolovitzky, Zoltán Kutalik, Kasper Lage, Donna K. Slonim, Julio Saez-Rodriguez, Lenore J. Cowen, Sven Bergmann, Daniel Marbach. Assessment of network module identification across complex diseases. Nature Methods, 2019, 16: 843–852.
nGuodong Du, Lei Ma, Jin-Shan Hu, Junpeng Zhang, Yan Xiang, Dangguo Shao, and Hongbin Wang. Prediction of 30-Day Readmission: An Improved Gradient Boosting Decision Tree Approach. Journal of Medical Imaging and Health Informatics, 2019, 9(3):620–627.
nJunpeng Zhang, Lin Liu, Jiuyong Li, Thuc Duy Le. LncmiRSRN: identification and analysis of long non-coding RNA related miRNA sponge regulatory network in human cancer. Bioinformatics,2018, 34(24): 4232-4240.
nTaosheng Xu, Ning Su, Lin Liu, Junpeng Zhang, Hongqiang Wang, Weijia Zhang, Jie Gui, Kui Yu, Jiuyong Li, Thuc Duy Le. miRBaseConverter: An R/Bioconductor Package for Converting and Retrieving miRNA Name, Accession, Sequence and Family Information in Different Versions of miRBase. BMC Bioinformatics, 2018, 19 (Suppl 19) :514.
nThuc Duy Le^#, Junpeng Zhang^#, Lin Liu, Buu Minh Thanh Truong, Shu Hu, Taosheng Xu, Jiuyong Li. Identifying microRNA targets in epithelial-mesenchymal transition using joint-intervention causal inference. In Proceedings of the 8th International Conference on Computational Systems-Biology and Bioinformatics (CSBio '17). ACM, New York, NY, USA, 2017, 34-41. DOI: 10.1145/**.**.
nJunpeng Zhang, Thuc Duy Le, Lin Liu, Jiuyong Li. Inferring miRNA sponge co-regulation of protein-protein interactions in human breast cancer. BMC Bioinformatics, 2017, 18:243.
nJunpeng Zhang, Thuc Duy Le, Lin Liu, Jiuyong Li. Identifying miRNA sponge modules using biclustering and regulatory scores. BMC Bioinformatics, 2017, 18(Suppl 3):44.
nThuc Duy Le^#, Junpeng Zhang^#, Lin Liu, Jiuyong Li. Computational methods for identifying miRNA sponge interactions. Briefings in Bioinformatics, 2017, 18 (4): 577-90.
nJunpeng Zhang, Thuc Duy Le, Lin Liu, Jianfeng He, Jiuyong Li. A novel framework for inferring condition-specific TF and miRNA co-regulation of protein-protein interactions. Gene, 2016, 577(1):55-64.
nJunpeng Zhang, Thuc Duy Le, Lin Liu, Jianfeng He, Jiuyong Li. Identifying miRNA synergistic regulatory network in heterogeneous human data via network motifs. Molecular Biosystems, 2016, 12(2):454-63.
nThuc Duy Le, Lin Liu, Junpeng Zhang, Bing Liu, Jiuyong Li. From miRNA regulation to miRNA-TF co-regulation: computational approaches and challenges. Briefings in Bioinformatics, 2015, 16(3):475-96.
nThuc Duy Le, Junpeng Zhang, Lin Liu, Bing Liu, Jiuyong Li. miRLAB: an R based dry lab for exploring miRNA-mRNA regulatory relationships. PLoS ONE, 2015, 10(12): e**.
nThuc Duy Le, Junpeng Zhang, Lin Liu, Jiuyong Li. Ensemble methods for miRNA target prediction from expression data. PLoS ONE, 2015, 10(6): e**.
nJunpeng Zhang, Thuc Duy Le, Lin Liu, Bing Liu, Jianfeng He, Gregory J Goodall, Jiuyong Li. Inferring condition-specific miRNA activity from matched miRNA and mRNA expression data. Bioinformatics, 2014, 30(21):3070-7.
nJunpeng Zhang, Thuc Duy Le, Lin Liu, Bing Liu, Jianfeng He, Gregory J Goodall, Jiuyong Li. Identifying direct miRNA-mRNA causal regulatory relationships in heterogeneous data. Journal of Biomedical Informatics, 2014, 52:438- 47.
nJunpeng Zhang, Bing Liu, Jianfeng He, Lei Ma and Jiuyong Li.Inferring functional miRNA-mRNA regulatory modules in epithelial–mesenchymal transition with a probabilistic topic model. Computers in Biology and Medicine, 2012, 42(4):428-37.
n马磊, 唐仲杰, 张俊鹏. 一种小型太阳能—生物质能源半自动禽蛋孵化器: 中国，专利: 0.4, 2013-04-03.
nR软件包miRspongeR（https://bioconductor.org/packages/miRspongeR/）
nR软件包miRSM（http://bioconductor.org/packages/miRSM/）
nR软件包miRLAB（https://bioconductor.org/packages/miRLAB/）
主要荣誉：
n担任Nucleic Acids Research, Bioinformatics, Briefings in Bioinformatics, PLOS Computational Biology, Journal of Biomedical Informatics, IEEE/ACM Transactions on Computational Biology and Bioinformatics等期刊杂志审稿人
nISIS系统评议专家
n云南省科技厅科技人才专家库专家
n云南省医学会医学工程学分会第七届委员会委员
n大理大学第九批中青年学术带头人
n2018-2022年云南省高等学校生物医学工程类专业教学指导委员会秘书
n2019年度获云南省医学会医工分会首届“CCI杯驼人医疗器械科技创新大赛”三等奖
n2018年度获大理大学优秀共产党员和大理大学教师教学质量二等奖
n2017年度获大理大学学生工作先进个人和履职考核优秀
n2016年度获Disease Module Identification DREAM Challenge(https://www.synapse.org/#!Synapse:syn**/wiki/407453) 二等奖
n2015年度获大理大学优秀班主任和履职考核优秀
n2014年度获云南省优秀硕士学位论文
n2013年度获大理大学第一届教学反思征文比赛一等奖