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鲍坚东，男，1981年出生，浙江宁海人，博士，福建农林大学生命科学院生物信息系讲师，硕导。2005年本科毕业于浙江大学生科院生物技术系，2011年获得浙江大学生物信息学博士。随后进入浙江省农业科学院从事博士后研究。2013年进入福建农林大学，2014年入选金山****“青年学术新秀”，2015年获得校****项目资助，2016年获得福建省出国留学基金资助，2017年在美国范德堡大学医学中心做访问****。主讲本科生课程《生物信息学程序设计》、《生物信息综合实验Ⅱ》、《生物信息学》和《生物数据库原理》。在《Molecular plant》、《New Phytologist》和《Molecular Breeding》等学术刊物上发表SCI论文多篇；主持国家自然科学基金1项目，校****项目1项，参与国家自然科学基金3项目。


个人信息
行政职务：
技术职称： 讲师
最后学位： 博士学位
邮编： 350002
电话： **
电子邮箱： baojd@fafu.edu.cn
办公地点： 田间科技园4号楼2楼
通讯地址： 福建省福州市仓山区上下店路15号福建农林大学生命科学学院


教育经历

1. 2005/08-2011/06，浙江大学，生物信息研究所，博士，导师：樊龙江
2. 2001/09-2005/06，浙江大学，生命科学学院生物技术系，本科




工作经历

1. 2013/12-至今，福建农林大学，生命科学学院生物信息系，讲师
2. 2017/01-2018/01,美国范德堡大学医学中心，访问****
3. 2012/11-2012/12，菲律宾国际水稻研究所，访问****
4. 2011/07-2013/10，浙江省农业科学研究院，病毒学与生物技术研究所，博后，合作导师：周波
5. 2009/08-2009/11,德国基尔大学，中德科研合作项目短期研修生



荣誉及奖励

2014年入选金山****“青年学术新秀”
2015年获得校****科研人才计划项目资助



教学活动
主讲本科生课程
《生物信息学》
《生物信息程序设计》
《生物信息综合实验2》
《生物数据库原理》
《毕业实习》
参与课程
中国大学慕课《生物大数据》
《基因组学》
研究生课程《生物信息学专题》





研究领域
利用生物信息学方法研究作物病害真菌与宿主互作过程中的变异机制




开授课程



科研项目


1.国家自然科学基金青年科学基金项目，稻瘟菌无毒基因Avrpi9的克隆和变异机制研究，**，21万，2014-2016，主持
2.福建省自然科学基金，基于泛基因组的稻瘟病菌群体分化机制研究，2019J01385，8万，2019-2022，主持
3.福建农林大学****项目，稻瘟菌无毒基因变异机制和监测方法研究，XJQ201511，2015-2018，30万，主持
4.国家自然科学基金青年项目，FgMsb3生化功能及其调控禾谷镰刀菌致病过程的机制研究，**，2018-2020，24万，参加
5.国家自然科学基金青年项目，稻瘟病菌无毒基因Avr-Pikh的克隆与分析，**，2015-2017，24万，参与
6.国家自然科学基金青年项目，基因组水平上结痂囊腔菌真菌的系统发育研究，**，2019-2021，25万，参加





论文著作

第一/并列第一/通讯作者论文

1.Jiandong Bao?, Meilian Chen?, Zhenhui Zhong?, Wei Tang?, Lianyu Lin, Xingtan Zhang, Haolang Jiang, Deyu Zhang, Chenyong Miao, Haibao Tang, Jisen Zhang, Guodong Lu, Ray Ming, Justice Norvienyeku*, Baohua Wang*, Zonghua Wang*. PacBio sequencing reveals transposable element as a key contributor to genomic plasticity and virulence variation in Magnaporthe oryzae. Molecular Plant. 2017, 10(11): 1465-1468. (IF3：10.74，植物科学1区)
2.Jiandong Bao, Jianqiang Yao, Jinqing Zhu, Weimin Hu, Daguang Cai, Yu Li, Qingyao Shu, Longjiang Fan*. Identification of glutinous maize landraces and inbred lines with altered transcription of waxygene. Molecular Breeding, 2012, 30(4): 1707-1714. (IF 3.251，农林科学1区)
3.Yunbo Kuang, Zhe Wang, Felix Abah, Hongli Hu, Baohua Wang, Zonghua Wang, Huiping Zhang, Zuyun Ye*, and Jiandong Bao*. Long-read genome sequence resource of Ascochyta versabiliscausing leaf spot disease in Pseudostellaria heterophylla. MolecularPlant-Microbe Interaction. 2020, 33(12):1438-1440.(IF 3.696，植物科学2区，通讯作者)
4.Wen-Ying Yu, Ming-Hui Peng, Jia-Jia Wang, Wen-Yu Ye, Ya-Ling Li, Tian Zhang, Ai-Rong Wang, Dong-Mei Zhang, Zong-Hua Wang, Gou-Dong Lu*, Jian-Dong Bao*. Microbial community associated with ectomycorrhizal Russula symbiosis and dominated nature areas in southern China. FEMS Microbiology Letters. 2021, online, doi: 10.1093/femsle/fnab028. (IF 1.987，生物3区，通讯作者)
5.Yuan Yuan?, Jiandong Bao?, Zhishan Chen, Anna Díez Villanueva, Wanqing Wen, Fangqin Wang, Dejian Zhao, Xianghui Fu, Qiuyin Cai, Jirong Long, Xiao-Ou Shu, Deyou Zheng, Victor Moreno, Wei Zheng, Weiqiang Lin*, Xingyi Guo*. Multi-omics analysis to identify susceptibility genes for colorectal cancer. HumanMolecularGenetics. 2021,online, doi: 10.1093/hmg/ddab021,PMID: **.(IF 5.10，生物2区，并列第一作者）
6.Hengyuan Guo?, Jiandong Bao?, Lianyu Lin, Zhixin Wang, Mingyue Shi, Yuting Huang, Rongbo Wang, Benjin Li, Peiqing Liu, Qinghe Chen*. Genome Sequence Data of Peronophythora litchii, an Oomycete Pathogen Causing Litchi Downy Blight. MolecularPlant-Microbe Interaction. 2021,online, doi: 10.1094/MPMI-11-20-0303-A, PMID: **.(IF 3.696，植物科学2区，并列第一作者).
7.Jun Wu?,Yanjun Kou?,Jiandong Bao?,Ya Li,Mingzhi Tang,Xiaoli Zhu, Ariane Ponaya,Gui Xiao,Jinbin Li,Chenyun Li,Min-Young Song,Christian Joseph R. Cumagun,Qiyun Deng,Guodong Lu,Jong-Seong Jeon, Naweed Naqviand Bo Zhou*. Comparative genomics identifies the Magnaporthe oryzaeavirulence effector AvrPi9that triggers Pi9-mediated blast resistance in rice. New Phytologist, 2015, 206(4): 1463-1475 (IF 7.672，植物科学1区，并列第一作者）
8.Mohammed YJaber?, JiandongBao?, XiuqinGao,Limei Zhang, Dou He, Xueyu Wang, Airong Wang, Zonghua Wang*, Baohua Wang*. Genome Sequence of Venturia oleaginea, the Causal Agent of Olive Leaf Scab. MolecularPlant-Microbe Interaction. 2020;33(9):1095-1097.(IF 3.696，植物科学2区，并列第一作者)
9.Zhenhui Zhong?, Justice Norvienyeku?, Meilian Chen?, Jiandong Bao?, Lianyu Lin, Liqiong Chen, Yahong Lin, Xiaoxian Wu, Zena Cai, Qi Zhang, Xiaoye Lin, Yonghe Hong, Jun Huang, Linghong Xu, Honghong Zhang, Long Chen, Wei Tang, Huakun Zheng, Xiaofeng Chen, Yanli Wang, Bi Lian, Liangsheng Zhang, Haibao Tang, Guodong Lu, Daniel J. Ebbole, Baohua Wang*, Zonghua Wang*. Directional selection from host plants is a major force driving host specificity in Magnaporthespecies. Scientific Reports, 2016, 6:25591. (IF 4.259，综合性期刊3区，并列第一作者)
10.Heng Xu?, Jiandong Bao?, Jisong Dai, Yongqing Li Y, Ying Zhu*. Genome-wide identification of new reference genes for qRT-PCR normalization under high temperature stress in rice endosperm. PLoS ONE, 2015, 10(11): e**. (IF 3.057，综合性期刊3区，并列第一作者）
11.Yong Wei?, Jiandong Bao?, Huijuan Cao, Jing Zhai, Chatchawan Jantasuriyarat, Hua Wang, Bo Zhou*. Haplotype variation and phylogeography of Rhizoctonia solaniAG1-IA strains based on rDNA 5.8S-ITS and ?-actin gene sequence analyses. Mycological Progress, 2014, 13(2):247-255. (IF 1.913，真菌学4区，并列第一作者)
其他参与论文：
1.Chengdong Yang?, Lianyu Lin?, Jiandong Bao, Zhixin Wang, Zhiting Li, Hengyuan Guo, Lin Lv, Dan Yu, Qinghe Chen*. Genome Sequence Resource of Phytophthora vignae, the causal agent of stem and root rot of cowpea. Molecular Plant-Microbe Interaction. 2021，online. doi: 10.1094/MPMI-12-20-0353-A. PMID: **.(IF 3.696，植物科学2区).
2.Guohua Duan, Jiandong Bao, Xiaomin Chen, Jiahui Xie,Yuchan Liu,Huiquan Chen, Huakun Zheng, Wei Tang* andZonghua Wang*. Large-Scale Genome Scanning within Exonic Regions Revealed the Contributions of Selective Sweep Prone Genes to Host Divergence and Adaptation in Magnaporthe oryzaeSpecies Complex. Microorganisms,2021, 9(3):562. (IF 4.152 生物2区)
3.JusticeNorvienyeku, Lili Lin, AbdulWaheed, XiaominChen,Jiandong Bao, Sami Aliyu, lianyuLin, AmmarahShabbir, WajjihaBatool, ZhenhuiZhong, JieZhou, GuodongLu, ZonghuaWang.Bayogenin 3‐O‐cellobioside confers non cultivar‐specific defense against the rice blast fungus Pyricularia oryzae. Plant Biotechnology Journal. 2021, 19(3):589-601. (IF 8.154 植物科学 1区)
4.Xingyi Guo ?, Weiqiang Lin ?, Wanqing Wen, Jeroen Huyghe, Stephanie Bien, Qiuyin Cai, Tabitha Harrison, Zhishan Chen, Conghui Qu, Jiandong Bao, Jirong Long, Yuan Yuan, Fangqin Wang, Mengqiu Bai, Goncalo R. Abecasis, Demetrius Albanes, Sonja I. Berndt, Stéphane Bézieau, D Timothy Bishop, Hermann Brenner, Stephan Buch, Andrea Burnett-Hartman, Peter T. Campbell, Sergi Castellví-Bel, Andrew T. Chan, Jenny Chang-Claude, Stephen J. Chanock, Sang Hee Cho, David V. Conti, Albert de la Chapelle, Edith JM. Feskens, Steven J. Gallinger, Graham G. Giles, Phyllis J. Goodman, Andrea Gsur, Mark Guinter, Marc J. Gunter, Jochen Hampe, Heather Hampel, Richard B. Hayes, Michael Hoffmeister, Ellen Kampman, Hyun Min Kang, Temitope O. Keku, Hyeong Rok Kim, Loic Le Marchand, Soo Chin Lee, Christopher I. Li, Li Li, Annika Lindblom, Noralane Lindor, Roger L. Milne, Victor Moreno, Neil Murphy, Polly A. Newcomb, Deborah A. Nickerson, Kenneth Offit, Rachel Pearlman, Paul D.P. Pharoah, Elizabeth A. Platz, John D. Potter, Gad Rennert, Lori C. Sakoda, Clemens Schafmayer, Stephanie L. Schmit, Robert E. Schoen, Fredrick R. Schumacher, Martha L. Slattery, Yu-Ru Su, Catherine M. Tangen, Cornelia M. Ulrich, Franzel JB. van Duijnhoven, Bethany Van Guelpen, Kala Visvanathan, Pavel Vodicka, Ludmila Vodickova, Veronika Vymetalkova, Xiaolong Wang, Emily White, Alicja Wolk, Michael O. Woods, Graham Casey, Li Hsu, Mark A. Jenkins, Stephen B. Gruber, Ulrike Peters, Wei Zhen. Identifying novel susceptibility genes for colorectal cancer risk from a transcriptome-wide association study of 125,478 subjects. Gastroenterology, 2020, online, DOI: 10.1053/j.gastro.2020.08.062. (IF 17.373, 胃肠肝病学 1区)
5.Lang Wu, Xiang Shu, Jiandong Bao, Xingyi Guo, the PRACTICAL, CRUK, BPC, CAPS, PEGASUS consortia, Zsofia Kote-Jarai, Christopher A. Haiman, Rosalind A. Eeles, Wei Zheng. Analysis of over 140,000 European descendants identifies genetically-predicted blood protein biomarkers associated with prostate cancer risk. Cancer Research, 2019, 79(18):4592-4598. (IF 9.727, 肿瘤学 1区)
6.Zhishan Chen, Wanqing Wen, Alicia Beeghly-Fadiel, Xiao-ou Shu, Virginia Díez-Obrero, Jirong Long, Jiandong Bao, Jing Wang, Qi Liu, Qiuyin Cai, Victor Moreno, Wei Zheng, Xingyi Guo. Identifying Putative Susceptibility Genes and Evaluating Their Associations with Somatic Mutations in Human Cancers. AJHG, 2019,105(3):477-492. (IF 10.502，遗传学1区)
7.Xiang Shu, Jiandong Bao, Lang Wu, Jirong Long, Xiao‐Ou Shu, Xingyi Guo, Yaohua Yang, Kyriaki Michailidou, Manjeet K. Bolla, Qin Wang, Joe Dennis, Irene L. Andrulis, Jose E. Castelao, Thilo D?rk Manuela Gago‐Dominguez, Montserrat García‐Closas, Graham G. Giles, Artitaya Lophatananon Kenneth Muir, H?kan Olsson, Gadi Rennert, Emmanouil Saloustros, Rodney J. Scott, Melissa C. Southey, Paul D.P. Pharoah, Roger L. Milne, Peter Kraft, Jacques Simard, Douglas F. Easton, Wei Zheng*. Evaluation of associations between genetically predicted circulating protein biomarkers and breast cancer risk. International Journal of Cancer. 2019, 146(8):2130-2138. (IF 5.145，肿瘤学2区)
8.Zhishan Chen, Wanqing Wen, Jiandong Bao, Krystle L Kuhs, Qiuyin Cai, Jirong Long, Xiao-Ou Shu, Wei Zheng, Xingyi Guo. Integrative genomic analyses of APOBEC-mutational signature, expression and germline deletion of APOBEC3 genes, and immunogenicity in multiple cancer types. BMC Med Genomics. 2019, 12(1):131. （IF 2.57，遗传学 3区）
9.Yingzi Yun, Aixia Song, Jiandong Bao, Shasha Chen, Songmao Lu, Chunzhen Cheng, Wenhui Zheng, Zonghua Wang, and liangsheng Zhang*. Genome data of Fusarium oxysporum f. sp. cubense race 1 and tropical race 4 isolates using long-read sequencing. MolecularPlant-Microbe Interaction. 2019, 32(10): 1270-1272. (IF 3.649，生化与分子生物学2区).
10.Zhenhui Zhong?, Meilian Chen?, Lianyu Lin, Yijuan Han, Jiandong Bao, Wei Tang, Lili Lin, Yahong Lin, Rewish Somai, Lin Lu, Wenjing Zhang, Jian Chen, Yonghe Hong, Xiaofeng Chen, Baohua Wang, Wei-Chiang Shen*, Guodong Lu, Justice Norvienyek*u, Daniel J. Ebbole *& Zonghua Wang*. Population genomic analysis of the rice blast fungus reveals specific events associated with expansion of three main clades. The ISME Journal. 2018, 12:1867-1878. (IF9.493, 微生物学1区)
11.Xingyi Guo*, Weiqiang Lin,Jiandong Bao, Qiuyin Cai, Xiao Pan, Mengqiu Bai, Yuan Yuan, Jiajun Shi, Yaqiong Sun, Mi-Ryung Han, Jing Wang, Qi Liu, Wanqing Wen, Bingshan Li, Jirong Long, Jianghua Chen, Wei Zheng. A comprehensive cis-eQTL analysis revealed target genes in breast cancer susceptibility loci identified in genome-wide association studies. American Journal of Human Genetics. 2018, 102(5):890-903. ( IF 9.924，遗传学1区 )
12.Longbiao Guo, Jie Qiu, Zujing Han, Zihong Ye, Chao Chen, Chuanjun Liu, Xiufang Xin, Chuyu Ye, Yingying Wang, Hongqing Xie, Yu Wang, Jiandong Bao, She Tang, Jie Xu, Yijie Gui, Fei Fu, Weidi Wang, Xingchen Zhang, Qianhua Zhu, Xuanmin Guang, Chongzhi Wang, Haifeng Cui, Daguang Cai, Song Ge, Gerald Tuskan, Xiaohan Yang, Qian Qian, Shengyang He, Jun Wang*, Xueping Zhou*, Longjiang Fan*. A host plant genome (Zizania latifolia) after a century-long endophyte infection. Plant Journal, 2015. 83:600-609. (IF 5.468, 植物科学1区)
13.Yong Zhang?, Kang Zhang?, Anfei Fang?, Yanqing Han, Jun Yang, Minfeng Xue, Jiandong Bao, Dongwei Hu, Bo Zhou, Xianyun Sun, Shaojie Li, Ming Wen, Nan Yao, Li-Jun Ma, Yongfeng Liu, Min Zhang, Fu Huang, Chaoxi Luo, Ligang Zhou, Jianqiang Li, Zhiyi Chen, Jiankun Miao, Shu Wang, Jinsheng Lai, Jin-Rong Xu, Tom Hsiang, You-Liang Peng*, Wenxian Sun*. Specific adaptation of Ustilaginoidea virensin occupying host florets revealed by comparative and functional genomics. Nature Communications, 2014, 5: 3849. (IF 11.47，综合性期刊1区)
14.Longjiang Fan*,Jiandong Bao, Yu Wang, Jianqiang Yao, Yijie Gui, Weiming Hu, Jinqing Zhu, Mengqian Zeng, Yu Li, Yunbi Xu. Post-domestication selection in the maize starch pathway.PLoS ONE, 2009, 4(10): e7612. (IF 4.351，生物学2区)
15.Xingyi Guo,Jiandong Bao, Longjiang Fan*. Evidence of selectively driven codon usage in rice: Implications for GC content evolution of Gramineae Genes.FEBS Letters, 2007, 581(5): 1015-1021. (IF 3.263，生化与分子生物学3区)



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