林璐 博士
Dr. Lu Lin
linlu2019@sdu.edu.cn

中国科学院青岛生物能源与过程研究所， 生物化学与分子生物学博士 (2007-2011)
美国俄克拉荷马大学 (University of Oklahoma) 环境基因组研究所， 联合培养博士 （2008-2010）
中国科学院 青岛生物能源与过程研究所，助理研究员 （2011-2012）
美国德州农工大学 (Texas A&M University)，博士后 （2012-2014）
浙江大学，副教授，博士生导师（2014-2019）
山东大学，研究员 （2019-至今）

Chinese Academy of Sciences Qingdao Institute of BioEnergy and Bioprocess Technology, Ph.D. in Molecular Biology and Biochemistry (2007-2011)
Visiting Scholar, University of Oklahoma, Institute for Environmental Genomics (2008-2010)
Assistant Investigator, Functional Genomics Group, BioEnergy Genome Center, Chinese Academy of Sciences Qingdao Institute of BioEnergy and Bioprocess Technology (2011-2012)
Postdoc Research Associate, Synthetic and Systems Biology Innovation Hub, Texas A&M University (2012-2014)
Associate Professor, Zhejiang University (2014-2019)
Professor, Shandong University (2019-Present)


研究方向：
海洋微生物化学元素循环、微生物代谢、微生物能源
Research Interests:
Marine microbial chemical element cycle, Microbial metabolism, Microbial biofuels

Selected Publications:
1. Lu Lin＃*, Xiaopeng Wang＃, Lanfang Cao, Meiying Xu (2019) Lignin catabolic pathways reveal unique characteristics of dye-decolorizing peroxidases in Pseudomonas putida. Environl Microbiol 21 (5): 1847-1863.
2. Wang, X., L. Lin*, J. Dong, J. Ling, W. Wang, H. Wang, Z. Zhang, and X. Yu (2018) Simultaneous Improvements of Pseudomonas Cell Growth and Polyhydroxyalkanoate Production from a Lignin Derivative for Lignin-Consolidated Bioprocessing. Appl Environ Microbiol, 84(18): p. 01469-18.
3.Tu, Q., L. Lin*, L. Cheng, Y. Deng, and Z. He, (2018) NCycDB: a curated integrative database for fast and accurate metagenomic profiling of nitrogen cycling genes. Bioinformatics, 28(**).
4. Lu Lin, Yanbing Cheng, Yunqiao Pu, Su Sun, Xiao Li, Mingjie Jing, Elizabeth A. Pierson, Dennis C. Gross, Bruce E. Dale, Susie Y. Dai, Arthur J. Ragauskas, Joshua S. Yuan* （2016） Systems Biology-Guided Biodesign of Consolidated Lignin Conversion. Green Chemistry 18 (20): 5536-5547.
5. Qichao Tu and Lin L* （2016） Gene Content Dissimilarity for Subclassification of Highly Similar Microbial Strains. BMC Genomics 17: 647-658.
6. Lin L, Yuetong Ji, Qichao Tu, Ranran Huang, Lin Teng, Xiaowei Zeng, Houhui Song, Kun Wang, Qian Zhou, Yifei Li, Qiu Cui, Zhili He, Jizhong Zhou, and Jian Xu* (2013) Microevolution from shock to adaptation revealed strategies improving ethanol tolerance and production in Thermoanaerobacter. Biotechnol Biofuels 6 (1):1-17.
7. Lin L and Xu J* (2013) Dissecting and engineering metabolic and regulatory networks of thermophilic bacteria for biofuel production. Biotechnol ADV, 31: 827–837.
8. Lin L, Song H, Tu Q, Qin Y, Zhou A, Wenbin Liu, Zhili He, Jizhong Zhou, Jian Xu* (2011) The Thermoanaerobacter Glycobiome Reveals Mechanisms of Pentose and Hexose Co-Utilization in Bacteria. PLoS Genet 7(10): e**.


个人简介：
林璐，女，山东大学海洋研究院研究员。
主要从事微生物驱动化学元素循环、微生物代谢及微生物能源相关研究。以海洋微生物为研究对象，运用（宏）组学技术、生物信息学分析技术、系统生物学手段与代谢工程技术相结合，开展海洋微生物组学和微生物代谢研究。探究海洋碳、氮元素循环的微生物参与过程和效应，揭示微生物参与海洋元素循环的机制。目前正在开展的工作主要包括（1）近海木质素代谢菌介导的碳循环机制及对环境因子的响应和（2）木质纤维素代谢产能菌遗传解析两部分。
LU Lin mainly engaged in microbial-driven chemical element cycle, microbial metabolism and microbial energy related research. To explore the microbial processes and effects of marine carbon and nitrogen cycle, and reveal the mechanism by which microbes participate in the circulation of marine elements, we employ marine microorganism as the research model to carry out marine microbiome and microbial metabolism study, via omics technology, bioinformatics analysis technology, system biology method and metabolic engineering technology. Currently, the major efforts include (1) the carbon cycle mechanism mediated by the lignin metabolism bacteria in the offshore and the response to environmental factors and (2) the genetic analysis of the bacterial lignocellulosic biofuels.