在岗研究生导师情况介绍
所系名称系统生物学实验室
性别男
专业名称生物信息学
技术职务研究员
行政职务重点实验室执行主任
Mail地址lnchen@sibs.ac.cn
指导博士
生总数11指导硕士
生总数22已毕业学生通讯地址上海市岳阳路320号细胞大楼系统生物学重点实验室
目前博士
生数9目前硕士
生数3目前在校生邮政编码200031
研究方向系统生物学,计算生物学,合成系统生物学,生物网络建模
研究工作主要研究方向为
(1)网络系统生物学(NetworkSystemsBiology),
(2)生物信息学(Bioinformatics),
(3)计算系统生物学(ComputationalSystemsBiology)方面的研究。
采用系统工程、动力学分析、优化和数学建模的方式,结合生物信息学和现代生命科学实验,以生物复杂网络和动态行为为主线来研究生命系统,特别是复杂疾病相关研究。
获奖情况
中科院-诺和诺德长城教授奖,2009.
指导研究
生情况
指导博士研究生7名。实验室现有硕博士连读生11名及硕士生3名。
个人简介陈洛南(TEL:021-5492-0100,021-6436-5937),中国科学院上海生命科学研究院研究员,博士生导师,中国科学院系统生物学重点实验室执行主任。目前,在计算系统生物学领域的主要国际学术期刊都担任重要工作,在日本和美国从事科研教学工作等25年以上,近五年来,在系统生物学研究领域发表了100篇以上期刊研究论文。
工作经历:
1991.4~1997.3:日本开发计算中心,主查研究员
1997.4~2000.3:日本大阪产业大学,副教授
2000.4~2002.3:美国加州大学洛山矶分校(UCLA),访问教授
2002.4~2010.3:日本大阪产业大学,终身教授
2009.4~现在:日本东京大学生产技术研究所,研究教授(兼)
2009.10~现在:中科院系统生物学重点实验室执行主任、研究员
学术组织兼职:
1.《BMCSystemsBiology》,SectionEditor
2.《IEEE/ACMTrans.onComputationalBiologyandBioinformatics》,AssociateEditor
3.《NeuralProcessingLetters》,AssociateEditor
4.《IETSystemsBiology》,编委(EditorialBoardMember)
5.《JournalofRoyalSocietyInterface》,编委(EditorialBoardMember)
6.《PLoSONE》,编委(EditorialBoardMember)
7.《MathematicalBiosciences》,编委(EditorialBoardMember)
8.《Int.J.ofSystemsandSyntheticBiology》,编委(EditorialBoardMember)
9.《Int.J.ofDataMiningandBioinformatics》,编委(EditorialBoardMember)
10.《Int.J.ofBioinformaticsResearchandApplications》,编委(EditorialBoardMember)
11.《J.ofSystemsScienceandComplexity》,编委(EditorialBoardMember)
12.《J.ofTheoreticalBiology》,编委(EditorialBoardMember)
13.《J.ofMolecularCellBiology》,编委(EditorialBoardMember)
14.《系统生物学百科全书》(EncyclopediaofSystemsBiology,Springer出版社),编辑(Editor)
15.IEEE-SMC《系统生物学委员会》,主席(Chair)
16.中国运筹学会《计算系统生物学分会》理事长
主页:http://www.sysbio.ac.cn/cb/chenlab/LuonanChen.htm
http://www.iis.u-tokyo.ac.jp/cgi/teacher.cgi?prof_id=l-chen
最近组织的国际会议
2013COLDSPRINGHARBORASIACONFERENCES:FrontiersinBioinformaticsandComputationalBiology.https://www.csh-asia.org/13bioinfo.html
2013IEEEInternationalConferenceonSystemsBiology(ISB2013).http://www.aporc.org/ISB/2013/index.php
2013The2ndInternationalConferenceonTranslationalBiomedicalInformatics.http://ictbi.imed-cn.org/ictbi2013/
2013InCoB2013-12thInternationalConferenceonBioinformatics,2013.http://ictbi.imed-cn.org/incob2013/
2013TranslationalBioinformaticsConference:TBC2013.http://www.snubi.org/TBC2013/
2014AsiaPacificBioinformaticsConference:APBC2014.http://admis.fudan.edu.cn/apbc2014/
近期论文专著:
1.L.Chen(陈洛南),R-S.Wang,X.Zhang.BiomolecularNetworks:MethodsandApplicationsinSystemsBiology,JohnWiley&Sons,2009.
2.L.Chen(陈洛南),R-Q.Wang,G.Li,K.Aihara.ModelingBiomolecularNetworksinCells:StructuresandDynamics,Springer-Verlag,2010.
3.L.Chen(陈洛南),R.Liu,X.Wang,K.Aihara.DynamicalNetworkBiomarkers,Springer-Verlag,2014.
书籍的执笔章节:
1.ZhaoSong,LuonanChen,DongXu,BioinformaticsMethodsforProteinIdentificationUsingPeptideMassFingerprinting.Proteomebioinformatics:Informaticsformass-spectrometrybasedproteinscience,theHumanPress,604:7-22,2010.
2.YongWang,RuishengWang,TruptiJoshi,Xiang-SunZhang,DongXu,LuonanChen.InferringGeneRegulatoryNetworksfromGeneticalGenomicsdata.InHandbookofResearchonComputationalMethodologiesinGeneRegulatoryNetworks,IGIGlobal,October,2009.
3.XingmingZhao,LuonanChen.ProteinFunctionPredictionwithDataMiningTechniques.InAlgorithmsinComputationalMolecularBiology:Techniques,ApproachesandApplications,JohnWiley&Sons,June,2010.
4.Yu-QingQiu,ShihuaZhang,Xiang-SunZhang,LuonanChen.ComputationalModelsforConditionSpecificGeneandPathwayInference.InAlgorithmsinComputationalMolecularBiology:Techniques,ApproachesandApplications,JohnWiley&Sons,2010.
编辑书籍:
1.OptimizationandSystemsBiology,LectureNotesinOperationsResearch7.EditedbyX-S.Zhang,L.Chen,L-Y.Wu,Y.Wang.WorldPublishingCorporation,Beijing,2007.
2.OptimizationandSystemsBiology,LectureNotesinOperationsResearch8.EditedbyX-S.Zhang,L.Chen,L-Y.Wu,Y.Wang.WorldPublishingCorporation,Beijing,2008.
3.OptimizationandSystemsBiology,LectureNotesinOperationsResearch9.EditedbyL.Chen,L-Y.Wu,Y.Wang,X-S.Zhang.WorldPublishingCorporation,Beijing,2009.
4.ComputationalSystemsBiology,LectureNotesinOperationsResearch13.EditedbyL.Chen,X-S.Zhang,BairongShen,L-Y.Wu,Y.Wang.WorldPublishingCorporation,Beijing,2010.
5.LifeSystemModelingandSimulation,SupplementaryvolumetoDCDISseriesB:ApplicationsandAlgorithms.EditedbyM.Fei,S.Ma,X.Li,L.Chen,Y.Ding.WatamPress,
Waterloo,2007.
6.CombinatorialOptimizationbyModernHeuristicTechniques,1997,NikanPublish,L.Chen(coauthor).
7.OperationandPlanninginDeregulatedPowerSystems,2002,TokyoDenKiDaiPublish,
L.Chen(coauthor).
8.AnIntroductiontoEnvironmentalSystems,2007,Denkishoin,L.Chen(coauthor).
最近的期刊论文:
1.JiguangWang,YidanSun,SiZheng,Xiang-SunZhang,HuarongZhou,andLuonanChen.APG:anActiveProtein-GeneNetworkModeltoQuantifyRegulatorySignalsinComplexBiologicalSystems.ScientificReports,DOI:10.1038/srep01097,2013.
2.MingzhuZhao,Hao-TengChang,ZhipingLiu,LuonanChen,DongqingWei.PredictingProtein--LigandInteractionsBasedonChemicalPreferenceFeatureswithitsApplicationtoNewD--AminoAcidOxidaseInhibitorDiscovery.CurrentPharmaceuticalDesign,2013.
3.ZikaiWu,YongWang,LuonanChen.ANewFrameworkforDrugRepositioningbyIncorporatingFunctionalInformation.IETSystemsBiology,2013.
4.MeiyiLi,TaoZeng,YongWang,LuonanChen.Detectingtissue-specificearly-warningsignalsforcomplexdiseasesbasedondynamicalnetworkbiomarkers:studyoftype-2diabetesbycross-tissueanalysis.BriefingsinBioinformatics,2013.
5.RuiLiu,KazuyukiAihara,LuonanChen.Dynamicalnetworkbiomarkersforidentifyingcriticaltransitionsofbiologicalprocesses.QuantitativeBiology,DOI10.1007/s40484-013-0008-0,2013.
6.SongyotNakariyakul,Zhi-PingLiu,LuonanChen.ASequence-basedComputationalApproachtoPredictingPDZDomain-PeptideInteractions.BBA-ProteinsandProteomics,2013.
7.ZikaiWu,YongWang,LuonanChen.Network-BasedDrugRepositioning.MolecularBioSystems,DOI:10.1039/C3MB25382A,2013.
8.ChengleiSun,Zheng-ZhengShi,XiaoboZhou,LuonanChen,Xing-MingZhao.PredictionofS-GlutathionylationSitesBasedonProteinSequences.PLoSONE8(2):e55512.doi:10.1371/journal.pone.0055512,2013.
9.GeorgePriyaDossC,NagasundaramN,ChiranjibChakraborty,LuonanChenandHailongZhu.ExtrapolatingtheeffectofdeleteriousnsSNPsinthebindingadaptabilityofflavopiridolwithCDK7protein:AMoleculardynamicsapproach,HumanGenomics,2013.
10.ZhiyuanYang,YanZhang,andLuonanChen.Investigationofanti-cancermechanismsbycomparativeanalysisofnakedmoleratandrat.BMCSystemsBiology,2013.
11.Zhi-PingLiu,WanweiZhang,KatsuhisaHorimoto,andLuonanChen.AGaussianGraphicalModelforIdentifyingSignificantlyResponsiveRegulatoryNetworksfromTimeCourseHigh-ThroughputData.IETSystemsBiology,2013.
12.PeipeiZhou,ShuimingCai,ZengrongLiu,LuonanChen,RuiqiWang.Couplingswitchesandoscillatorsasameanstoshapecellularsignalsinbiomolecularsystems.Chaos,Solitons&Fractals,7242,2013.
13.RuiLiu,MeiyiLi,Zhi-PingLiu,JiaruiWu,LuonanChen,KazuyukiAihara.Identifyingcriticaltransitionsandtheirleadingnetworksincomplexdiseases.ScientificReports,DOI:10.1038/srep00813,2012.
XiaopingLiu,RuiLiu,Xing-MingZhao,LuonanChen.Detectingearly-warningsignalsoftype1diabetesanditsleadingbiomolecularnetworksbydynamicalnetworkbiomarkers.BMCMedicalGenomics,doi:10.1186/1755-8794-6-S2-S8,2013.
14.XiaopingLiu,JiguangWang,LuonanChen.Whole-exomesequencingrevealsrecurrentsomaticmutationnetworksincancer.CancerLetters,http://dx.doi.org/10.1016/j.canlet.2012.11.002,2012.
15.XianwenRen,YongWang,LuonanChen,Xiang-SunZhangandQiJin.ellipsoidFN:atoolforidentifyingaheterogeneoussetofcancerbiomarkersbasedongeneexpressions.NucleicAcidsResearch,2012.
16.XiujunZhang,KeqinLiu,Zhi-PingLiu,BéatriceDuval,Jean-MichelRicher,Xing-MingZhao,Jin-KaoHao,andLuonanChen.NARROMI:anoiseandredundancyreductiontechniqueimprovesaccuracyofgeneregulatorynetworkinference.Bioinformatics,DOI:10.1093/bioinformatics/bts619,2012.
17.YingWang,XiaoweiChen,Zhi-PingLiu,QiangHuang,YongWang,Xiang-SunZhang,RunshengChen,LuonanChen.DenovopredictionofRNA-proteininteractionsfromsequenceinformation.MolecularBioSystems,DOI:10.1039/c2mb25292a,2012.
18.BengongZhang,LuonanChen,KazuyukiAihara.Incrementalstabilityanalysisofstochastichybridsystems.NonlinearAnalysis(SeriesB:RealWorldApplications),2012.
19.HailongZhu,R.ShyamaPrasadRao,JimingLiu,TaoZeng,LuonanChen.Reconstructingdynamicgeneregulatorynetworksfromsample-basedtranscriptionaldata.NucleicAcidsResearch,doi:10.1093/nar/gks860,2012.
20.ZhenshuWen,Zhi-PingLiu,ZhengrongLiu,YanZhang,LuonanChen.Anintegratedapproachtoidentifycausalnetworkmodulesofcomplexdiseaseswithapplicationtocolorectalcancer.JournaloftheAmericanMedicalInformaticsAssociation,doi:10.1136/amiajnl-2012-001168,2012.
21.ZhenshuWen,Zhi-PingLiu,YiqingYan,GuanyingPiao,ZhengrongLiu,JiaruiWuandLuonanChen.Identifyingresponsivemodulesbymathematicalprogramming:anapplicationtobuddingyeastcellcycle.PLoSOne,7(7),e41854,2012.
22.LuonanChen,RuiLiu,ZhipingLiu,MeiyiLi,KazuyukiAihara.Detectingearly-warningsignalsforsuddendeteriorationofcomplexdiseasesbydynamicalnetworkbiomarkers.ScientificReports,2,342;DOI:10.1038/srep00342,2012.
23.ZhipingLiu,LuonanChen.Proteome-widepredictionofprotein-proteininteractionsfromhigh-throughputdata.Protein&Cell,2012.
24.HeeSookLee,TaejeongBae,Ji-HyunLee,DaeGyuKim,YoungSunOh,YeongjunJang,Ji-TeaKim,Jong-JunLee,AlessioInnocenti,ClaudiuTSupuran,LuonanChen,KyoohyoungRhoandSunghoonKim.Rationaldrugrepositioningguidedbyanintegratedpharmacologicalnetworkofprotein,diseaseanddrug.BMCSystemsBiology,2012.
25.Ke-QinLiu,Zhi-PingLiu,Jin-KaoHao,LuonanChen,Xing-MingZhao.Identifyingdysregulatedpathwaysincancersfrompathwayinteractionnetworks.BMCBioinformatics,13:126doi:10.1186/1471-2105-13-126,2012.
26.WeiSong,JiguangWang,YingYang,Nai-HeJing,Xiang-SunZhang,LuonanChen,Jia-RuiWu.Rewiringdrug-activatedp53-regulatorynetworkfromsuppressingtopromotingtumorigenesis.JournalofMolecularCellBiology,4(4),197-206,2012.
27.JiajunZhang,LuonanChen,andTianshouZhou.AnalyticalDistributionandTunabilityofNoiseinaModelofPromoterProgress.BiophysicalJournal,Vol.102,1247–1257,2012.
28.LuonanChen,JiaruiWu.Systemsbiologyforcomplexdiseases.JournalofMolecularCellBiology,doi:10.1093/jmcb/mjs022,2012.
29.H.J.Li,J.H.Zhang,Z.P.Liu,L.Chen,X.S.Zhang.Identifyoverlappingcommunitiesinsocialnetworksusingmulti-scalelocalinformationexpansion.TheEuropeanPhysicalJournalB,2012.
30.YongWang,Xiang-SunZhang,andLuonanChen.Modellingbiologicalsystemsfrommoleculestodynamicalnetworks.BMCSystemsBiology,2012.
31.Zhi-PingLiu,JiguangWang,Yu-QingQiu,RossKKLeung,Xiang-SunZhang,StephenKWTsuiandLuonanChen.InferringaproteininteractionmapofMycobacteriumtuberculosisbasedonsequencesandinterologs.doi:10.1186/1471-2105-13-S7-S6,BMCBioinformatics,2012.
32.DanningHe,ZhipingLiu,MasaoHonda,ShuichiKaneko,LuonanChen.CoexpressionnetworkanalysisinchronichepatitisBandChepaticlesionrevealsdistinctpatternsofdiseaseprogressiontohepatocellularcarcinoma.JournalofMolecularCellBiology,4(3),140-152,2012.
33.LinWang,Zhi-PingLiu,Xiang-SunZhang,LuonanChen.Predictionofhotspotsinproteininterfacesusingarandomforestmodelwithhybridfeatures.ProteinEngineering,DesignandSelection(PEDS),doi:10.1093/protein/gzr066,2012.
34.Zhi-PingLiu,YongWang,Xiang-SunZhangandLuonanChen:Network-basedanalysisofcomplexdiseases.IETSystemsBiology,doi:10.1049/iet-syb.2010.0052,2012.
35.Hui-JiaLi,YongWang,Ling-YunWu,Zhi-PingLiu,Luo-NanChenandXiang-SunZhang.CommunitystructuredetectionbasedonPottsmodelandnetwork’sspectralcharacterization.EurophysicsLetters,2012.
36.TaoZengandLuonanChen.Tracingdynamicbiologicalprocessesduringphasetransition.BMCSystemsBiology,accepted,2012.
37.GuanyinPiao,ShigeruSaito,YidanSun,Zhi-PingLiu2,YongWang,XiaoHan,JiaruiWu,HuarongZhou,LuonanChen,KatsuhisaHorimoto.AcomputationalprocedureforidentifyingmasterregulatorcandidatesfordiabetesprogressioninGoto-Kakizakirat.BMCSystemsBiology,accepted,2012.
38.DanningHe,Zhi-PingLiu,LuonanChen.Identificationofdysfunctionalmodulesanddiseasegenesincongenitalheartdiseasebyanetwork-basedapproach.BMCGenomics,12:592,2011.
39.XiaopingLiu,ZhipingLiu,XingmingZhao,LuonanChen.Identifyingdiseasegenesandmodulebiomarkerswithdifferentialinteractions.JournaloftheAmericanMedicalInformaticsAssociation,doi:10.1136/amiajnl-2011-000658,2011.
40.XiujunZhang,XingmingZhao,KunHe,LeLu,YongweiCao,JingdongLiu,Jin-KaoHao,ZhipingLiu,LuonanChen.InferringgeneregulatorynetworksfromgeneexpressiondatabyPC-algorithmbasedonconditionalmutualinformation.Bioinformatics,doi:10.1093/bioinformatics/btr626,2011.
41.RuiqiWang,KaihuiLiu,LuonanChenandKazuyukiAihara.Neuralfatedecisionsmediatedbytrans-activationandcis-inhibitioninNotchsignaling.Bioinformatics,doi:10.1093/bioinformatics/btr551,2011.
42.AchyutSapkota,XiaopingLiu,XingmingZhao,YongweiCao,JingdingLiu,ZhipingLiu,LuonanChen.DIPOS:DatabaseofInteractingProteinsinOryzaSativa.MolecularBioSystems,DOI:10.1039/C1MB05120B,2011.
43.JiguangWang,QiangHuang,Zhi-PingLiu,YongWang,Ling-YunWu,LuonanChen,andXiang-SunZhang.NOA:anovelNetworkOntologyAnalysismethod.NucleicAcidsResearch,doi:10.1093/nar/gkr251,2011.
44.Zhi-PingLiu,YongWang,Xiang-SunZhangandLuonanChen.DetectingandanalyzingdifferentiallyactivatedpathwaysinbrainregionsofAlzheimer’sdiseasepatients.MolecularBioSystems,DOI:10.1039/C0MB00325E,2011.
45.YongWang,Xiang-SunZhang,LuonanChen.Computationalsystemsbiology:integrationofsequence,structure,network,anddynamics.BMCSystemsBiology,doi:10.1186/1752-0509-5-S1-S1,2011.
46.GrazianoChesi,LuonanChen.SystemsBiology.Int.J.Robust.NonlinearControl,21:1729,2011.
47.D.Liu,X.Chang,Z.Liu,L.Chen,R.Wang.BistabilityandoscillationsingeneregulationmediatedbysmallnoncodingRNAs.PLoSONE6(3):e17029.doi:10.1371/journal.pone.0017029,2011.
48.X.Chang,D.Liu,Z.Liu,L.Chen,R.Wang.Adaptationofsimplemolecularnetworkstotimedependentstimulus.AsianJournalofControl,Volume13,Issue5,pages701C712,September2011.
49.ZhenpingLi,RuishengWang,Xiang-SunZhang,LuonanChen.Drugtargetidentificationbasedonfluxbalanceanalysisinmetabolicnetwork.BMCSystemsBiology,accepted,2011.
50.SongyotNakariyakul,Zhi-PingLiu,LuonanChen.Detectingthermophilicproteinsthroughselectingaminoacidanddipeptidecompositionfeatures.AminoAcids,DOI10.1007/s00726-011-0923-1,2011.
51.HongboLei,JifengZhang,LuonanChen.PropertyofMultipleEquilibriaforSSIMetabolicModule.BMCSystemsBiology,doi:10.1186/1752-0509-5-S1-S15,2011.
52.HuarongZhou,ZhipingLiu,KazuHorimoto,LuonanChen.NetworkScreeningofGoto-KakizakiRatLiverMicroarrayDataduringDiabeticProgression.BMCSystemsBiology,doi:10.1186/1752-0509-5-S1-S16,2011.
53.Hong-BoLei,XinWang,RuiqiWang,Xin-GuangZhu,LuonanChen,Ji-FengZhang.Aparameterconditionforrulingoutmultipleequilibriaofthephotosyntheticcarbonmetabolism.AsianJournalofControl,Volume13,Issue5,pages611C624,September2011.
54.LuonanChen,JamesLam,ZidongWang.ANALYSISANDCONTROLOFBIOLOGICALNETWORKS.AsianJournalofControl,DOI:10.1002/asjc.424,2011.
55.GrazianoChesi1,LuonanChenandKazuyukiAihara.Ontherobuststabilityoftimevaryinguncertaingeneticregulatorynetworks.Int.J.Robust.NonlinearControl,DOI:10.1002/rnc.1775,2011.
56.VasilescuGabriel,LuonanChen.SpiceSimulationofIntracellularTransport:FreeDiffusion.AsianJournalofControl,Volume13,Issue5,pages738C748,September2011
57.HongboLei,JifengZhang,LuonanChen.Multi-equilibriumpropertyofmetabolicnetworks:Exclusionofmulti-stabilityforSSNmetabolicmodules.InternationalJournalofRobustandNonlinearControl,DOI:10.1002/rnc.1718,2011.
58.D.Liu,X.Chang,Z.Liu,L.Chen,R.Wang.Theeffectofcoupledfeedbackonnoisefilteringinsignaltransductionnetworks.J.Syst.Sci.Complex,vol.23,942C950,2010.
59.XiaopingLiu,Wei-HuaTang,XingmingZhao,LuonanChen.ANetworkApproachtoPredictPathogenicGenesforFusariumgraminearum.PLoSOne,5(10):e13021,2010.
60.YongWang,Xiang-SunZhang,andLuonanChen.OptimizationMeetsSystemsBiology.BMCSystemsBiology,doi:10.1186/1752-0509-4-S2-S1,2010.
61.Zhi-PingLiu,Ling-YunWu,YongWang,Xiang-SunZhang,LuonanChen.Predictionofprotein-RNAbindingsitesbyarandomforestmethodwithcombinedfeatures.Bioinformatics,Vol.26,1616C1622,2010.
62.ZikaiWu,Xing-MingZhao,LuonanChen.Asystemsbiologyapproachtoidentifyeffectivecocktaildrugs.BMCSystemsBiology,doi:10.1186/1752-0509-4-S2-S7,2010.
63.ZhipingLiu,WeimingXia,Xiang-SunZhang,LuonanChen.IdentifyingdysfunctionalcrosstalkofpathwaysinvariousregionsofAlzheimers’diseasebrains.BMCSystemsBiology,doi:10.1186/1752-0509-4-S2-S11,2010.
64.ChengleiSun,Xing-MingZhao,WeihuaTang,LuonanChen.FGsub:Fusariumgraminearumproteinsubcellularlocalizationpredictionfromprimarystructures.BMCSystemsBiology,doi:10.1186/1752-0509-4-S2-S12,2010.
65.LinWang,Ling-YunWu,YongWang,Xiang-SunZhang,LuonanChen.SANA:analgorithmforsequentialandnon-sequentialproteinstructurealignment.AminoAcids,39(2):417-25,2010.
66.Yu-QingQiu,ShihuaZhang,Xiang-SunZhang,LuonanChen.Detectingdiseaseassociatedmodulesandprioritizingactivegenesbasedonhighthroughputdata.BMCBioinformatics,11:26,2010.
67.YiDing,PengWang,L.Goel1,LuonanChen,PohChiangLoh.APenaltySchemeforReducingElectricityPriceVolatility.IEEETransactionsonPowerSystems,25(1):223-233,2010.
68.ZhaoSong,LuonanChen,DongXu,BioinformaticsMethodsforProteinIdentificationUsingPeptideMassFingerprinting.Proteomebioinformatics:Informaticsformass-spectrometrybasedproteinscience,MethodsinMolecularBiology,604:7-22,2010.
69.XingmingZhao,KazuyukiAihara,LuonanChen.Adiscriminativeapproachtoidentifyingdomain-domaininteractionsfromprotein-proteininteractions.PROTEINS:Structure,Function,andBioinformatics,78(5),1243-1253,2009.
70.XingmingZhao,Xiao-WeiZhang,WeihuaTang,LuonanChen.FPPI:Fusariumgraminearumprotein-proteininteractiondatabase.JournalofProteomeResearch,DOI:10.1021/pr900415b,2009.
71.JiguangWang,ShihuaZhang,YongWang,LuonanChen,Xiang-SunZhang.Disease-agingnetworkrevealssignificantrolesofaginggenesinconnectinggeneticdiseases.PLoSComputationalBiology,PLoSComputBiol5(9):e1000521.doi:10.1371journal.pcbi.1000521,2009.
72.ZhaoSong,LuonanChen,DongXu.ConfidenceAssessmentforProteinIdentificationbyUsingPeptide-MassFingerprintingData.Proteomics,9(11),3090-3099,2009.
73.Y.Li,Z.Liu,J.Zhang,R.Wang,L.Chen.Synchronisationmechanismsofcircadianrhythmsinthesuprachiasmaticnucleus.IETSystemsBiology,3(2),100-112,2009.
74.X.S.Zhang,R.S.Wang,Y.Wang,J.Wang,Y.Qiu,L.WangandL.Chen.Modularityoptimizationincommunitydetectionofcomplexnetworks.EurophysicsLetters,87:38002,2009.
75.R.Wang,G.Jin,X-S.Zhang,L.Chen.Modellingpost-transcriptionalregulationofmicroRNAsinE.coli.BMCBioinformatics,10(Suppl4):S6,2009.
76.Y.Wang,X-S.Zhang,L.Chen.Anetworkbiologystudyoncircadianrhythmbyintegratingvariousomicsdata.OMICS,13(4):313-24,2009.
77.Y.Wang,J.Shen,B.Niu,Z.Liu,L.Chen.Robustnessofintervalgenenetworkswithmultipletime-varyingdelaysandnoise.Neurocomputing,doi:10.1016/j.neucom.2009.02.012,2009.
78.Y.Wang,Z.Ma,J.Shen,Z.Liu,L.Chen.PeriodicoscillationindelayedgenenetworkswithSUMregulatorylogicandsmallperturbations.MathematicalBiosciences,doi:10.1016/j.mbs.2009.03.010,2009.
79.Y.Qiu,S.Zhang,X-S.Zhang,L.Chen.Identifyingdifferentiallyexpressedpathwaysviaamixedintegerlinearprogrammingmodel.IETSystemsBiology,3,475-486,2009.
80.JianweiShen,ZengrongLiu,WeixingZheng,FengdanXu,LuonanChen.OscillatorydynamicsinasimplegeneregulatorynetworkmediatedbysmallRNAs.PhysicaA:StatisticalMechanicsanditsApplications.388(14),2995-3000,2009.
81.GuangxuJin,XiaoboZhou,KeminCui,Xiang-SunZhang,LuonanChen,andSteveT.C.Wong.Cross-platformmethodforidentifyingcandidatenetworkbiomarkersforprostatecancer.IETSystemsBiology,3(6),505-512,2009.
82.B.Wang,L.Chen,K.Aihara.LimitedabilitydrivenphasetransitionsinthecoevolutionprocessinAxelrod’smodel.PhysicsLettersA,373(17),1519-1523,2009.
83.L-Y.Wu,Z.Li,R.Wang,X-S.Zhang,L.Chen.Self-organizingmapapproachesforthehaplotypeassemblyproblemMathematicsandComputersinSimulation.MathematicsandComputersinSimulation,79(10),3026-3037,2009.
84.Z.Li,R.Wang,X-S.Zhang,L.Chen.Detectingdrugtargetsinmetabolicnetworksbyintegerlinearprogramming.IETSystemsBiology,Vol.3,No.6,pp.523-533,2009.
85.H.Fan,Z.Wang,L.Chen,K.Aihara.Feedbackmechanisminnetworkdynamicswithpreferentialflow.PhysicalReviewE,79:026107,2009.
86.Xing-MingZhao,Rui-ShengWang,LuonanChen,KazuyukiAihara.Automaticmodelingofsignalingpathwaysbynetworkflowmodel.JournalofBioinformaticsandComputationalBiology,7(2):309-22,2009.
87.Z.Wu,X.Zhao,L.Chen.Detectingsignaltransductionpathwaysfromhigh-throughputdata.Mol.Cells,27,271-277,2009.
88.S.Fan,L.Chen,W.J.Lee.Short-termLoadForecastingUsingComprehensiveCombinationbasedonMulti-MeteorologicalInformation.IEEETrans.onIndustryApplication.Vol.45,No.4,pp.1460-1466,2009.
89.S.Fan,Y.Yokoyama,L.Chen.ForecastingtheWindGenerationUsingATwo-stageNetworkBasedonMeteorologicalInformation.IEEETransactionsonEnergyConversion.Vol.24,No.2,pp.474-482,2009.
90.G.Jin,X.Zhou,H.Wang,H.Zhao,K.Cui,X.Zhang,L.Chen,S.Hazen,K.Li,S.Wong.Theknowledge-integratednetworkbiomarkersdiscoveryforMajorAdverseCardiacEvents.JournalofProteomeResearch,7(9),4013-4021,10.1021/pr8002886,2008.
91.S.Zhang,X-S.Zhang,L.Chen.Biomolecularnetworkquerying:apromisingapproachinsystemsbiology.BMCSystemsBiology,2:5,doi:10.1186/1752-0509-2-5,2008.
92.X.Zhao,R.Wang,L.Chen,K.Aihara.Uncoveringsignaltransductionnetworksfromhighthroughputdatabyintegerlinearprogramming.NucleicAcidsResearch,Vol.36,No.9,e48,doi:10.1093/nar/gkn145,2008.
93.Z.Liu,L.Wu,Y.Wang,X-S.Zhang,L.Chen.Bridgingproteinlocalstructuresandproteinfunctions.AminoAcids,DOI10.1007/s00726-008-0088-8,2008.
94.X.Zhao,K.Aihara,L.Chen.Proteinfunctionpredictionwithhigh-throughputdata.AminoAcids,Vol.35,pp.517-530,DOI10.1007/s00726-008-0077-y,2008.
95.Y.Xie,L.Chen,Y.Kang,K.Aihara.ControllingtheonsetofHopfbifurcationintheHodgkin-Huxleymodel.PhysicalReviewE.77,061921,2008.
96.B.Wang,K.AiharaandL.Chen.Jamminginweightedscale-freegradientnetworks.EurophysicsLetters.83,28006,2008.
97.C.Li,L.Chen,K.Aihara.Impulsivecontrolofstochasticsystemswithapplicationsinchaoscontrol,chaossynchronization,andneuralnetworks.Chaos.Vol.18,023132,2008.
98.T.Zhou,J.Zhang,Z.Yuan,L.Chen.SynchronizationofGeneticOscillators.Chaos.Vol.18,No.3,037126,2008.
99.Z.Li,S.Zhang,R.Wang,X.S.Zhang,L.Chen.Novelquantitativefunctionforcommunitydetection.PhysicalReviewE,77,036109,2008.
100.X.Zhao,Y.Wang,L.Chen,K.Aihara.Genefunctionpredictionusinglabeledandunlabeleddata.BMCBioinformatics,9:57,doi:10.1186/1471-2105-9-57,2008.
101.X.Zhao,Y.Wang,L.Chen,K.Aihara.Proteindomainannotationwithintegrationofheterogeneousinformationsources.Proteins:Structure,Function,andBioinformatics,Vol.72,no.1,461-473,2008.
102.G.He,L.Chen,K.Aihara.AssociativeMemorywithaControlledChaoticNeuralNetwork.Neurocomputing,71,2794-2805,2008.
103.Y.Wang,L-Y.Wu,J.Zhang,Z.Zhan,X-S.Zhang,L.Chen.EvaluatingProteinSimilarityFromCoarseStructures.IEEE/ACMTransactionsonComputationalBiologyandBioinformatics,doi:10.1109/TCBB.2007.70250,2008.
104.R.Wang,C.Li,L.Chen,K.Aihara.ModelingandAnalyzingBiologicalOscillationsinMolecularNetworks.ProceedingsofTheIEEE,Vol.96,1361-1385,2008.
105.R.-S.Wang,S.Zhang,Y.Wang,X.-S.Zhang,L.Chen.ClusteringcomplexnetworksandbiologicalnetworksbyNonnegativeMatrixFactorizationwithvarioussimilaritymeasures.Neurocomputing,72,134-141,2008.
106.X.-M.Zhao,Y.Wang,L.Chen,andK.Aihara.Proteindomainannotationwithpredicteddomain-domaininteractionnetworks.Protein&PeptideLetters,15,456-462,2008.
107.X.-M.Zhao,L.Chen,andK.Aihara.Proteinfunctionpredictionwiththeshortestpathinfunctionallinkagegraphandboosting.InternationalJournalofBioinformaticsResearchandApplications,4,375-384,2008.
108.Z.-P.Liu,L.-Y.Wu,Y.Wang,X.-S.Zhang,L.Chen.Proteincavityclusteringbasedoncommunitystructureofpocketsimilaritynetwork.InternationalJournalofBioinformaticsResearchandApplications,4,445-460,2008.
109.Z.Liu,L-Y.Wu,X-S.Zhang,L.Chen.Analysisofproteinsurfacepatternsbypocketsimilaritynetworkinasystemsbiologyframework.Protein&PeptideLetter,15,448-455,2008.
110.S.Fan,L.Chen,W.J.Lee.MachineLearningBasedSwitchingModelforElectricityLoadForecasting.EnergyConversionandManagement,Vol.49,No.6,pp.1331-1344,2008
111.Zhi-PingLiu,Ling-YunWu,YongWang,LuonanChenandXiang-SunZhang.PredictingGeneOntologyFunctionsfromProtein’sRegionalSurfaceStructures.BMCBioinformatics,8:475,doi:10.1186/1471-2105-8-475,2007.
112.GuangxuJin,ShihuaZhang,Xiang-SunZhang,LuonanChen.Hubswithnetworkmotifsorganizemodularitydynamicallyintheprotein-proteininteractionnetworkofyeast.PLoSONE,2(11):e1207,doi:10.1371/journal.pone.0001207,2007.
113.Rui-ShengWang,Xiang-SunZhang,LuonanChen.Inferringtranscriptionalinteractionsandregulatoractivitiesfromexperimentaldata.MoleculesandCells,vol.24,307-315,2007.
114.R.Wang,Y.Wang,L-Y.Wu,X-S.Zhang,L.Chen.AnalysisonMulti-domainCooperationforPredictingProtein-ProteinInteractions.BMCBioinformatics,8:391,doi:10.1186/1471-2105-8-391,2007.
115.R.Wang,Y.Wang,X-S.Zhang,L.Chen.InferringTranscriptionalRegulatoryNetworksfromHigh-throughputData.Bioinformatics,23(22):3056-3064,2007.
116.X.Zhao,L.Chen,K.Aihara.Proteinclassificationwithimbalanceddata.Proteins:Structure,Function,andBioinformatics,Vol.70,1125-1132,2007.
117.L.Chen,Y.Wang,M.Fei,Z.Liu.SystemsBiologyfromTheoreticalandEngineeringPerspective.SCIENCE&TECHNOLOGYREVIEW,Vol.25,No.10,5-10,2007.
118.C.Li,L.Chen,K.Aihara.StochasticStabilityofGeneticNetworkswithDisturbanceAttenuation.IEEETCAS-II,Vol.54,No.10,892-896,2007.
119.Z.Li,S.Zhang,Y.Wang,X-S.Zhang,L.Chen.Alignmentofmolecularnetworksbyintegerquadraticprogramming.Bioinformatics,23,1631-1639,2007.
120.S.Zhang,G.Jin,X-S.Zhang,L.Chen.Discoveringfunctionsandrevealingmechanismsatmolecularlevelfrombiologicalnetworks,Proteomics,Vol.7,2856-2869,2007.
121.R.Wang,L.Chen,K.Aihara.DetectionofCellularRhythmsandGlobalStabilitywithinInterlockedFeedbackSystems,MathematicalBiosciences,Vol.209,171-189,2007.
122.C.Li,L.Chen,K.Aihara.StochasticSynchronizationofGeneticOscillatorNetworks.BMCSystemsBiology,doi:10.1186/1752-0509-1-6,2007.
123.Z.Wu,Y.Wang,E.Feng,L.Chen.Anewgeometric-topologicalmethodtomeasureproteinfoldsimilarity.ChemicalPhysicsLetters,Vol.433,432-438,2007.
124.Z.Wu,E.Feng,Y.Wang,L.Chen.DiscriminationofOuterMembraneProteinsbyaNewMeasureofInformationDiscrepancy.Protein&PeptideLetters,14,37-44,2007.
125.C.Li,L.Chen,K.Aihara.Asystemsbiologyperspectiveonsignalprocessingingeneticnetworkmotifs.IEEESignalProcessingMagazine,Vol.24,No.2,136-147,2007.
126.ZhaoSong,LuonanChen,AshwinGanapathy,Xiu-FengWan,LaurentBrechenmacher,NengbingTao,DavidEmerich,GaryStacey,DongXu.DevelopmentandAssessmentofScoringFunctionsforProteinIdentificationUsingPeptideMassFingerprintingData.ELECTROPHORESIS,28,864-870,2007.
127.S,Fukutome,H.Azuma,N.Honjou,L.Chen,DevelopmentofGeneration-TransmissionExpansionPlanningMethodBasedonAHierarchicalModel,TransactionsIEEofJapan,Vol.127-B,No.1,130-136,2007.
128.S.Fan,C.Mao,L.Chen,Next-DayElectricityPriceForecastingUsingaHybridNetwork.IETGeneration,Transmission&Distribution,Vol.1,No.1,176-182,2007.
129.R-S.Wang,L-Y.Wu,X-S.Zhang,L.Chen.AMarkovChainModelforHaplotypeAssemblyfromSNPFragments.GenomeInformatics,Vol.17,No.2.2006.
130.Y.Wang,L-Y.Wu,X-S.ZhangandL.Chen.Exploringtheclassificationofproteinstructuresongeometricpatternsbyneuralnetworks.InternationalJournalofComputationalIntelligenceResearch,Vol.2,No.1,pp.105-109,2006.
131.Y.Wang,X-S.Zhang,L.Chen.SupervisedClassificationofProteinStructures,InternationalJournalofBioinformaticsResearchandApplications,Vol.3,No.2,2006.
132.L.Chen,L-Y.Wu,Y.Wang,S.Zhang,X-S.Zhang,RevealingDivergentEvolution,IdentifyingCircularPermutationsandDetectingActive-SitesbyProteinStructureComparison,BMCStructuralBiology,doi:10.1186/1472-6807-6-18,2006.
133.Y.Wang,T.Joshi,D.Xu,X-S.Zhang,L.Chen,InferringGeneRegulatoryNetworksfromMultipleMicroarrayDatasets,Bioinformatics,22,2413-2420,2006.
134.S.Fan,C.Mao,L.Chen,ElectricityPeakLoadForecastingwithSelf-OrganizingMapandSupportVectorRegression,TransactionsIEEofJapan,Vol.1,330-336,2006.
135.C.Li,L.Chen,K.Aihara,TransientResetting:anovelmechanismforbiologicalsynchrony,PLoSComputationalBiology,DOI:10.1371/journal.pcbi.0020103.eor,2006.
136.Y.Wang,L-Y.Wu,X-S.Zhang,L.Chen,AutomaticClassificationofProteinStructuresBasedonConvexHullRepresentationbyIntegratedNeuralNetwork.LectureNotesinComputerScience,SpringerBerlinHeidelberg,Vol.3959,505-514,2006.
137.R.Wang,L.Chen,K.Aihara,SynchronizingaMulticellularSystembyExternalInput:AnArtificialControlStrategy,Bioinformatics,22,1775-1781,2006.
138.R.Wang,L.Chen,K.Aihara,”ConstructionofGeneticOscillatorswithInterlockedFeedbackNetworks”,JournalofTheoreticalBiology,Vol.242,454-463,2006.
139.C.Li,L.Chen,K.Aihara,”SynchronizationofCoupledNonidenticalGeneticOscillators”,PhysicalBiology,3,37-44,2006.
140.R.Li,L.Chen,R.Yokoyama,”APricingMethodforTransmissionLossBasedonSensitivityAnalysis”,IEEETrans.onPowerSystems,Vo.21,No.3,pp.1201-1208,2006.
141.X-S.Zhang,R-S.Wang,L-Y.Wu,L.Chen,”ModelsandAlgorithmsforHaplotypingProblem,”CurrentBioinformatics,1,105-114,2006.
142.L.Chen,L-Y.Wu,Y.Wang,X-S.Zhang,”InferringProteinInteractionsfromExperimentalDatabyAssociationProbabilisticMethod,”Proteins,62,833-837,2006.
143.T.Wachi,S.Fukutome,L.Chen,Y.Makino,”DecompositionofMarketClearingPriceinElectricityMarkets,”TransactionsIEEofJapan,Vol.126-B,No.3,pp.297-307,2006.
144.L.Chen,R.Wang,”DesigningGeneRegulatoryNetworkswithSpecifiedFunctions,”IEEETrans.onCircuitsandSystems-I:FundamentalTheoryandApplications,Vol.53,No.11,2444-2450,2006.
145.C.Li,L.Chen,K.Aihara,”StabilityofGeneticNetworkswithSUMRegulatoryLogic,”IEEETrans.onCircuitsandSystems-I:FundamentalTheoryandApplications,Vol.53,No.11,2451-2458,2006.
146.Z.Jing,R.Wang,L.Chen,J.Deng,”AttractiveRegionsinPowerSystemsbySingularPerturbationAnalysis,”DOI10.1007/3-7643-7429-28,DifferentialEquationswithSymbolicComputation,2006.
147.S.Fan,L.Chen,”Short-TermLoadForecastingBasedonanAdaptiveHybridMethod,”IEEETrans.onPowerSystems,21,392-401,2006.
148.S.Fan,C.Mao,L.Chen,”OptimalcoordinatedPETandgeneratorexcitationcontrolforpowersystems,”InternationalJournalofElectricalPower&EnergySystems,28,No.3,158-165,2006.
149.L.Chen,L-Y.Wu,R.Wang,Y.Wang,S.Zhang,X-S.Zhang,”ComparisonofProteinStructuresbyMulti-ObjectiveOptimization,”GenomeInformatics,Vol.16,No.2,pp.114-124,2005.
150.T.Zhou,L.Chen,K.Aihara,”MolecularCommunicationthroughStochasticSynchronizationInducedbyExtracellularFluctuations,”PhysicalReviewLetter,95,178103,2005.
151.R.Li,R.Yokoyama,L.Chen,”PricingforLoadandWheelingChargeConsideringTransmissionPathsinDeregulatedPowerMarkets”InternationalJournalofElectricalPower&EnergySystems,Vol.27,pp.496-505,2005.
152.T.Zhou,L.Chen,R.Wang,”Amechanismofsynchronizationininteractingmulti-cellgeneticsystems,”PhysicaD,211,107-127,2005.
153.Z.Li,W.Zhou,X.Zhang,L.Chen,”AParsimoniousTree-GrowMethodforHaplotypeInference,”Bioinformatics,21,3475-3481,2005.
154.T.Zhou,L.Chen,R.Wang,”Excitationfunctionsofcoupling,”PhysicalReviewE,71,066211,2005.
155.R.Wang,L.Chen,”Synchronizinggeneticoscillatorsbysignallingmolecules,”JournalofBiologicalRhythms,20,257-269,2005.
156.L.Chen,R.Wang,T.Zhou,K.Aihara,”Noise-inducedCooperativeBehaviorinaMulti-CellSystem,”Bioinformatics,Vol.21,2722-2729,2005.
157.T.Zhou,L.Chen,Y.Tang,X.Zhang,”AligningMultipleProteinStructuresbyDeterministicAnnealing,”JournalofBioinformaticsandComputationalBiology,Vol.3,No.4,837-860,2005.
158.X.Zhang,Y.Wang,Z.Zhan,L.Wu,L.Chen,”ExploringProtein’sOptimalHPConfigurationsbySelf-OrganizingMapping,”JournalofBioinformaticsandComputationalBiology,Vol.3,No.2,385-400,2005.
159.P.Wei,L.Chen,H-D.Chiang,”Biddingpriceanalysisforcompetitivegeneratorsandlargeconsumers,”InternationalJournalofElectricalPower&EnergySystems,Vol.27,169-176,2005.
160.S.Fan,C.Mao,L.Chen,”Peakloadforecastingusingtheself-organizingmap”,640-647,AdvancesinNeuralNetworks,Springer,2005.
161.Geerli,L.Chen,I.Kurihara,K.Takahasi,”CooperativeGameTheoryAppliedtoTransmissionExpansionCostAllocationforCongestionRelief,”InternationalJournalofElectricalPower&EnergySystems,Vol.27,61-67,2005.
162.Z.Li,X.Zhang,L.Chen,”UniqueOptimalFoldingsofProteinonaTriangularLattice,”JournalofAppliedBioinformatics,Vol.4,105-116,2005.
163.L.Chen,T.Zhou,Y.Tang,”ProteinStructureAlignmentbyDeterministicAnnealing,”Bioinformatics,Vol.21,51-62,2005.
164.R.Wang,Z.Jing,L.Chen,”ModellingPeriodicOscillationinGeneRegulatoryNetworksbyCyclicFeedbackSystems,”BulletinofMathematicalBiology,Vol.67,339-367,2005.
165.T.Wachi,S.Fukutome,L.Chen,Y.Makino,G.Koshimizu,”ApplicationforSinglePriceAuctionModel(SPA)inACNetwork,”TransactionsIEEofJapan,Vol.125-B,81-89,2005.
166.T.Zhou,L.Chen,R.Wang,K.Aihara,IntercellularCommunicationsInducedbyRandomFluctuations,GenomeInformatics,Vol.15,No.2,223-233,2004.
167.R.Wang,Z.Jing,L.Chen,”Periodicoscillatorsingeneticnetworkswithnegativefeedbackloops,”WSEASTrans.onMathematics,Vol.3,No.1,pp.150-156,2004.
168.R.Wang,T.Zhou,Z.Jing,L.Chen,”ModellingPeriodicOscillationofBiologicalSystemswithMultipleTimeScaleNetworks,”SystemsBiology,Vol.1,No.1,pp.71-84,2004.
169.L.Chen,R.Wang,T.Kobayashi,K.Aihara,”Dynamicsofgeneregulatorynetworkswithcelldivisioncycle,”PhysicalReviewE,Vol.70,011909,2004.
170.P.Charusanti,X.Hu,L.Chen,D.Neuhauser,J.Distefano,AmathematicalmodelofBCRABLautophosphorylation,signalingthroughtheCRKLpathway,andgleevecdynamicsinchronicmyeloidleukemia,DiscreteandContinuousDynamicalSystems-SeriesB,Vol.4,No.1,pp.99-114,2004.
171.T.Zhou,J.Lu,L.Chen,Z.Jing,Y.Tang,”Ontheoptimalsolutionsforpowerflowequations,”InternationalJournalofElectricalPower&EnergySystems,Vol.25,pp.533-541,2003.
172.Z.Jing,D.Xu,Y.Chang,L.Chen,”Bifurcations,chaos,andsystemcollapseinathreenodepowersystem,”InternationalJournalofElectricalPower&EnergySystems,Vol.25,No.6,pp.443-461,2003.
173.T.Kobayashi,L.Chen,K.Aihara,”ModelingGeneticSwitcheswithPositiveFeedbackLoops,”JournalofTheoreticalBiology,Vol.221,pp.379-399,2003.
174.S.Fukutome,H.Azuma,T.Saishoji,M.Yasuda,H.Saito,K.Ogimoto,L.Chen,”FastpowersystemreliabilityevaluationbyMonteCarlomethod,”TransactionsIEEofJapan,Vol.122-B,No.3,pp.369-374,2002.
175.R.Yuan,Z.Jing,L.Chen,”UNIFORMASYMPTOTICSTABILITYOFHYBRIDDYNAMICALSYSTEMSWITHDELAY,”IEEETrans.onAutomaticControl,Vol.48,No.2,pp.344-348,2003.
176.L.Chen,K.Aihara,”AModelofPeriodicOscillationforGeneticRegulatorySystems,”IEEETrans.onCircuitsandSystems-I:FundamentalTheoryandApplications.Vol.49,No.10,pp.1429-1436,2002.
177.Z.Jing,J.Wang,L.Chen,”ComputationofLimitCycleviaHigherOrderHarmonicBalanceApproximationandItsApplicationtoa3-BusPowerSystem,”IEEETrans.onCircuitsandSystems-I:FundamentalTheoryandApplications.Vol.49,No.9,pp.1360-1370,2002.
178.L.Chen,K.Aihara,”StabilityofGeneticRegulatoryNetworkswithTimeDelay,”IEEETrans.onCircuitsandSystems-I:FundamentalTheoryandApplications.Vol.49,No.5,pp.602-608,2002.
179.L.Chen,H.Suzuki,K.Wachi,Y.Shimura,”ComponentsofNodalPricesForElectricPowerSystems,”IEEETrans.onPowerSystems.Vol.17,no.1,pp.41-49,2002.
180.S.Fukutome,M.Yasuda,L.Chen,”FastpowersystemreliabilityevaluationbyMonteCarlomethod,”TransactionsIEEofJapan,Vol.122-B,No.3,pp.369-374,2002.
181.L.Chen,K.Aihara,”Chaoticdynamicsofneuralnetworksanditsapplicationtocombinatorialoptimization,”JournalofDynamicalSystemsandDifferentialEquations,invitedreviewpaper,vol.9,no.3,pp.139-168,2001.
182.L.Chen,K.Aihara,”StabilityandBifurcationAnalysisofDifferential-Difference-AlgebraicEquations,”IEEETransactionsonCircuitsandSystems-I:FundamentalTheoryandApplications.Vol.48,No.3,pp.308-326,2001.
183.L.Chen,Y.Tada,H.Okamoto,R.Tanabe,A.Ono,”OptimalOperationSolutionsofPowerSystemswithTransientStabilityConstraints,”IEEETransactionsonCircuitsandSystems-I:FundamentalTheoryandApplications.Vol.48,No.3,pp.327-339,2001.
184.Geerli,L.Chen,R.Yokoyama,”Pricingandoperationinderegulatedelectricitymarketbynoncooperativegame,”ElectricalPowerSystemsResearch,Vol.57,pp.133-139,2001.
185.J.Wang,L.Chen,Z.Jing,”Chaosandasymptoticalstabilityindiscrete-timerecurrentneuralnetworkswithgeneralizedinput-outputfunction,”ScienceinChina,vol.44,no.2,pp.193-200,2001.
186.L.Chen,K.Aihara,”StrangeAttractorsinChaoticNeuralNetworks,”IEEETransactionsonCircuitsandSystems-I:FundamentalTheoryandApplications,Vol.47,No.10,pp.1455-1468,2000.
187.L.Chen,etal.,”OptimalOperationofPowerSystemsConstrainedbyTransientStability,”TransactionsIEEofJapan,Vol.120-B,No.12,pp.1582-1594,2000.
188.L.Chen,etal.,”AnalysisofNodalPricesforPowerSystems,”TransactionsIEEofJapan,Vol.120-B,No.5,pp.686-693,2000.
189.Geerli,L.Chen,etal.,”NegotiationModelsforElectricPricingandLoadDispatchinElectricityMarket,”TransactionsIEEofJapan,Vol.120-B,No.2,pp.219-226,2000.
190.L.Chen,H.Tanaka,K.Katou,Y.Nakamura,”Stabilityanalysisfordigitalcontrolsofpowersystems,”ElectricPowerSystemsResearch,Vol.55,pp.79-86,2000.
191.L.Chen,K.Aihara,”GlobalSearchingAbilityofChaoticNeuralNetworks,”IEEETransactionsonCircuitsandSystems-I:FundamentalTheoryandApplications,Vol.46,No.8,pp.974-993,1999.
192.L.Chen,S.Matoba,etal.,”SurrogateConstraintMethodforOptimalPowerFlow,”IEEETransactionsonPowerSystems,Vol.13,No.3,pp.1084-1089,1998.
193.L.Chen,H.Susuki,etal.,”MeanFieldTheoryforOptimalPowerFlow,”IEEETransactionsonPowerSystems,Vol.12,No.4,pp.1481-1486,1997.
194.L.Chen,K.Aihara,”ChaosandAsymptoticalStabilityindiscrete-timeneuralnetworks”,PhysicaD,Vol.104,pp.286-325,1997.
195.L.Chen,etal”AComparisonofReliabilityEvaluationTechniquesforPowerSystems,”TransactionsofIEEJapan,Vol.116-B,No.3,1996.
196.L.Chen,K.Aihara,”ChaoticSimulatedAnnealingbyaNeuralNetworkModelwithTransientChaos,”NeuralNetworks,Vol.8,No.6,pp.915-930,1995.
197.L.Chen,K.Aihara,”ChaoticSimulatedAnnealingforCombinatorialOptimization,”N.Aoki,etal(Eds.),DynamicSystemsandChaos,WorldScientific,Vol.1,pp.319-322,1995.
198.L.Chen,K.Aihara,”Chaoticsimulatedannealingandcombinatorialoptimization,”JournalofComputationTechnology,Vol.25,No.2,pp.20-28,1994.
199.L.Chen,K.Aihara,”TransientChaoticNeuralNetworksandChaoticSimulatedAnnealing,”M.Yamaguti(Editor),TowardstheHarnessingofChaos,ElsevierScienceB.V.,pp.347-352,1994.
200.L.Chen,etal,”OptimalElectricGenerationPlanningforInterconnectedSystemsbyBendersDecomposition,”TransactionsofIEEJapan,,Vol.B-113,No.6,pp.643-652,1993.
201.L.Chen,J.Toyoda,”OptimalGeneratingUnitMaintenanceSchedulingforMulti-AreaSystemwithNetworkConstraints,”IEEETransactionsonPowerSystems,Vol.PWRS-6,No.3,pp.1168-1174,August1991.
202.L.Chen,J.Toyoda,”PowerArrivalEvaluationofBulkSystemIncludingNetworkConstraintsBasedonLinearProgrammingApproach,”IEEETransactionsonPowerSystems,Vol.PWRS-6,No.1,pp.37-42,February1991.
203.L.Chen,J.Toyoda,”MaintenanceSchedulingBasedonTwoLevelHierarchicalStructuretoEqualizeIncrementalRisk,”IEEETransactionsonPowerSystems,Vol.PWRS-5,No.4,pp.1510-1516,November1990.
204.L.Chen,J.Toyoda,”OptimalUnitCommitmentSchedulingofThermalPowerSystemBasedontheMonteCarloMethod,”TransactionsofIEEJapan,Vol.B-109,No.3,pp.73-80,1989.
205.L.Chen,J.Toyoda,”ANewApproachtoMaintenanceSchedulingBasedonIncrementalReliabilityIndex,”TransactionsofIEEJapan,Vol.B-108,No.5,pp.205-212,1988.
ConferencePapers
(Morethan200conferencepapers),omission.