基本信息
蔡磊男博导中国科学院微生物研究所
电子邮件： cail@im.ac.cn
通信地址： 北京市朝阳区北辰西路1号院3号微生物所
邮政编码： 100101

研究领域1）特殊生态类群真菌（水生、溶洞、耐热、耐碱、寡营养等）的生物多样性及资源应用。 2）植物病原真菌的分类、系统演化及物种形成。
3）服务于生物安全、食品安全、生物多样性保护、海关检疫等领域的真菌分子检测、鉴定、筛查技术研发。





















招生信息
招生专业071005-微生物学

招生方向真菌分类、系统演化及资源利用


教育背景2002-10--2006-06香港大学博士 微生物学
2000-09--2002-07云南大学硕士 微生物学
1993-09--1998-07清华大学学士


教授课程真菌系统学及进化生物学-上
真菌系统学及进化生物学
系统微生物学
微生物学系列讲座


专利与奖励
奖励信息（1） 中国菌物学会-戴芳瀾优秀青年奖, 其他, 2015
（2） 中国科协-全国优秀科技工作者, , 部委级, 2012
（3） 国际菌物学会-菌物学家奖, , 其他, 2011
（4） 亚洲菌物学会-菌物学家奖, , 其他, 2011
（5） 国家科技进步奖, 二等奖, 国家级, 2004
（6） 云南省技术发明奖, 三等奖, 省级, 2002
（7） 云南省科技进步奖, 一等奖, 省级, 2001

专利成果（ 1 ） 一种咖啡浆果炭疽病菌快速分子检测试剂盒及其应用, 发明, 2015, 第 2 作者, 专利号: **
（ 2 ） 向日葵黑茎病菌的检测试剂盒, 发明, 2014, 第 2 作者, 专利号: 20**


出版信息
发表论文（1）Species boundaries in plant pathogenic fungi: a Colletotrichum case study,BMC Evolutionary Biology,2016,通讯作者
（2）Unravelling Diaporthe species associated with Camellia,Systematics and Biodiversity,2016,通讯作者
（3）Inferring phylogeny and speciation of Gymnosporangium species, and their coevolution with host plants.,Scientific Reports,2016,通讯作者
（4）Fungal Communities in sediments of subtropical Chinese seas as estimated by DNA metabarcoding,Scientific Reports,2016,通讯作者
（5）Resolving the?Phoma?enigma,Studies in Mycology,2015,通讯作者
（6）Unravelling?Diaporthe?species associated with?Camellia,Systematics and Biodiversity,2015,通讯作者
（7）Diaporthe species occurring on Lithocarpus glabra in China, with descriptions of five new species,Fungal Biology,2015,通讯作者
（8）Polyphasic characterization of four new plant pathogenic Phyllosticta species from China, Japan and the United States,Fungal Biology,2015,通讯作者
（9）Molecular phylogeny of Ascotricha, including two new marine algae-associated species,Mycologia,2015,通讯作者
（10）A polyphasic approach to characterise two novel species of Phoma (Didymellaceae),Phytotaxa,2015,通讯作者
（11）A phylogenetic assessment and taxonomic revision of the thermotolerant hyphomycete genera Acrophialophora and Taifanglania,Mycologia,2015,通讯作者
（12）Psychrophilid fungi from the world’s roof,Persoonia ,2015,通讯作者
（13）Pochonia cordycepisociata, a new species associated with Chinese cordyceps in Tibet, China,Phytotaxa,2015,通讯作者
（14）Fungal Biodiversity Profiles 1–10,Cryptogamie Mycologie,2015,第2作者
（15）Unravelling Colletotrichum species associated with Camellia: employing ApMat and GS loci to resolve species in the C. gloeosporioides complex,Persoonia ,2015,通讯作者
（16）Synopsis of Phyllosticta in China,Mycology,2015,通讯作者
（17）Polyphasic characterization of four new plant pathogenic Phyllosticta species from China, Japan and the United States,Fungal Biology,2014,通讯作者
（18）The Colletotrichum gigasporum species complex,Persoonia ,2014,通讯作者
（19）Diaporthe species occurring on Lithocarpus glabra in China, with descriptions of five new species,Fungal Biology,2014,通讯作者
（20）Phylogenetic assessment of Chaetomium indicum and allied species, with the introduction of three new species and epitypification of C. funicola and C. indicum,Mycological Progress,2014,通讯作者
（21）Cochlioquinone derivatives with Apoptosis-inducing effects on HCT116 colon cancer cells from the phytopathogenic fungus Bipolaris luttrellii L439,Chemistry and Biodiversity,2014,通讯作者
（22）Temperate pine barrens and tropical Rain forests are both rich in undescribed fungi,Plos one,2014,通讯作者
（23）One stop shop: backbone trees for important phytopathogenic genera: 1,Fungal diversity,2014,通讯作者
（24）Naming and outline of Dothideomycetes-2014 including proposals for the protection or suppression of generic names,Fungal diversity,2014,通讯作者
（25）Three new species of Tilletia on Eriachne from north-western Australia,Mycoscience,2014,通讯作者
（26）Three new species of Phomopsis in Gutianshan Nature Reserve in China,Mycological Progress,2014,通讯作者
（27）A new thermophilic species of Myceliophthora from China,Mycological Progress,2014,通讯作者
（28）A polyphasic approach to characterise two novel species of Phoma (Didymellaceae),Phytotaxa,2014,通讯作者
（29）Molecular phylogeny of Ascotricha, including two new marine algae-associated species,Mycologia,2014,通讯作者
（30）Endophytic Colletotrichum species from Bletilla ochracea (Orchidaceae), with descriptions of seven new species,Fungal Diversity,2013,通讯作者
（31）Endophytic Colletotrichum from tropical grasses with a new speces C. endophytica.,Fungal Diversity,2013,通讯作者
（32）Molecular diagnosis of Colletotrichum kahawae by Loop-Mediated Isothermal Amplification (LAMP),Journal of Plant Pathology,2013,通讯作者
（33）A novel species of Gliocladiopsis from freshwater habitat in China,Cryptogamie Mycologie,2013,通讯作者
（34）Species-specific real-time detection of Colletotrichum kahawae,Journal of Applied Microbiology,2013,通讯作者
（35）Colletotrichum species associated with cultivated citrus in China,Fungal Diversity,2013,通讯作者
（36）Colletotrichum species on grape in Guizhou and Yunnan provinces, China,Mycoscience,2013,第4作者
（37）Typification and phylogenetic study of Phyllosticta ampelicida and P. vaccinii.,Mycologia,2013,通讯作者
（38）Circumscription of the anthracnose pathogens Colletotrichum lindemuthianum and C. nigrum.,Mycologia,2013,通讯作者
（39）Polyphasic characterization of Plectosphaerella oligotrophica, a new oligotrophic species from China,Mycoscience,2013,通讯作者
（40）Rasamsonia composticola, a new thermophilic species isolated from compost in Yunnan, China,Mycological Progress ,2013,通讯作者
（41）Morphological and phylogenetic characterization of two new species of Phyllostictafrom China,Mycological Progress ,2013,通讯作者
（42）Species of the Colletotrichum gloeosporioides complex associated with anthracnose diseases of Proteaceae,Fungal Diversity,2013,通讯作者
（43）Aquapeziza: a new genus from freshwater, and its morphological and phylogenetic relationships to Pezizaceae. ,Mycologia,2012,通讯作者
（44）Application of the Apn2/MAT locus to improve the systematics of the Colletotrichum gloeosporioides complex: an example from coffee (Coffea spp.) hosts. ,Mycologia,2012,通讯作者
（45）Phylogeny of Chaetothyriaceae in northern Thailand including three new species. ,Mycologia,2012,通讯作者
（46）First report of leaf disease on Cinnamomum subavenium caused by Colletotrichum fioriniae. ,Plant Disease ,2012,第3作者
（47）Polyphasic characterization of three novel Phyllosticta spp.,Persoonia,2012,通讯作者
（48）Morphological and molecular characterization of a novel species of Simplicillium from China,Cryptogamie, Mycologie,2012,通讯作者
（49）Conlarium duplumascospora gen. et. sp. nov. and Jobellisia guangdongensis sp. nov. from freshwater habitats in China.,Mycologia,2012,通讯作者
（50）Species-specific real-time detection of Colletotrichum kahawae.,Journal of Applied Microbiology,2012,通讯作者
（51）Three new ascomycetes from freshwater in China,Mycologia,2012,通讯作者
（52）Host-jump drives rapid and contemporary ecological speciation of the emergent fungal pathogen Colletotrichum kahawae,Molecular Ecology,2012,第3作者
（53）A phylogenetic and taxonomic re-evaluation of the Bipolaris-Cochliobolus-Curvularia complex.,Fungal Diversity,2012,通讯作者
（54）The evolution of species concepts and species recognition criteria in plant pathogenic fungi.,Fungal Diversity,2011,第1作者
（55） Colletotrichum species on Orchidaceae in southwest China. ,Cryptogamie Mycologie ,2011,第2作者
（56）Cochliobolus: an overview and current status of species. ,Fungal Diversity ,2011,通讯作者
（57）The need to carry out re-inventory of plant pathogenic fungi. ,Tropical Plant Pathology ,2011,第1作者
（58）Colletotrichum species from Jasmine (Jasminum sambac),Fungal Diversity,2011,通讯作者
（59）Epitypification of Colletotrichum musae, the causative agent of banana,Mycoscience,2011,通讯作者
（60）Neotypification of Colletotrichum coccodes, the causal agent of potato black dot disease and tomato anthracnose,Mycology,2011,通讯作者
（61）Biology of Colletotrichum horii, the causal agent of persimmon anthracnose,Mycology,2010,第3作者
（62）Phylogeny and morphology of Neodeightonia palmicola sp. nov. from palms,Sydowia,2010,第3作者
（63）Colletotrichum: species, ecology and interactions,IMA Fungus,2010,第3作者
（64）Colletotrichum gloeosporioides is not a common pathogen on tropical fruits,Fungal Diversity,2010,通讯作者
（65）Four new freshwater fungi associated with submerged wood from Southwest Asia,Sydowia,2010,通讯作者
（66）Morphology: still essential in a molecular world,Mycotaxon,2010,通讯作者
（67）Neotypification of Colletotrichum falcatum, the causative agent of red-rot disease in sugarcane,Sydowia,2010,通讯作者
（68）A new species of Colletotrichum from Cordyline fruticosa and Eugenia javanica causing anthracnose disease,Mycotaxon,2010,通讯作者
（69）Morphological and molecular characterization of Mariannaea aquaticola sp. nov. collected from freshwater habitats,Mycological Progress,2010,第1作者
（70）Culture collections, the new herbaria for fungal pathogens,Fungal Diversity,2010,通讯作者
（71）Guignardia/Phyllosticta species on banana,Cryptogamie Mycologie,2010,第3作者

发表著作（ 1 ）  ,Genera of freshwater fungi,Fungal Diversity Press,2006-06,第1作者
（ 2 ）  ,The molecular phylogeny of freshwater Sordariomycetes and discomycetes. In: Freshwater fungi and fungal-like organisms,Walter de Gruyter GmbH,2014-07,第1作者
（ 3 ）  ,axonomy of filamentous asexual fungi from freshwater habitats, links to sexual morphs and their phylogeny. In: Freshwater fungi and fungal-like organisms,Walter de Gruyter GmbH,2014-07,第5作者


科研活动
科研项目（ 1 ） 真菌志淡水真菌大顶环科及相关属志, 主持,国家级,2011-01--2016-09
（ 2 ） 真菌分类学, 主持,国家级,2014-01--2016-12
（ 3 ） 西南喀斯特地区特色微生物资源及多样性调查, 主持,国家级,2014-05--2018-04
（ 4 ） 重要植物病原真菌的物种概念与名录重建, 主持,国家级,2012-01--2016-12
（ 5 ） 植物健康与粮食安全相关真菌的DNA条形码及数据库的建立及使用, 参与,市地级,2013-01--2016-12
（ 6 ） 高频跨境生物多目标高精准检测技术研究, 主持,国家级,2016-07--2020-12
（ 7 ） 检疫性真菌参比物质及标准库建设, 主持,部委级,2016-09--2018-06
（ 8 ） 植物病原真菌的物种形成与演化, 主持,部委级,2016-08--2020-12
（ 9 ） 广西大宗经济作物真菌病害调查及重要病原的检测鉴定方法, 主持,省级,2016-11--2020-12

参与会议（1）Speciation of Macalpinomyces eriachnes, a complex of 10 host specific species第十二届海峡两岸菌物学学术研讨会会Li Ying-Ming2015-11-07
（2）Speciation of Macalpinomyces eriachnes, a complex of 10 host specific species中国植物病理学会2015年学术年会Li Ying-Ming2015-07-21
（3）Biodiversity of fungi from several special habitatsYuanying Su et al.2013-09-19
（4）Biodiversity of aquatic fungi in ChinaDM Hu et al.2013-09-19
（5）Cryptic species in plant pathogenic fungi, challenge and solutionF. Liu, K. Zhang, Y.-H. Gao, Y.-Y. Su and L. Cai2013-08-26
（6）Biodiversity of aquatic fungi in ChinaCai Lei2013-03-18
（7）Plant pathogenic fungi: cryptic species unmaskedLei Cai2012-08-09
（8）Apn1/MAT locus is a potential additional barcode for cryptic species in Colletotrichum gloeosporioides complexLei Cai2011-11-28
（9） The need to carry out re-inventory of plant pathogenic fungiLei Cai 2011-09-30
（10）Plant Pathogenic Fungi, species concept and the need to carry out re-inventoryLei Cai2011-08-07
（11）Integrating freshwater anamorphic fungi into teleomorphic classification systemDM Hu et al. 2011-08-07
（12）Species concept in ColletotrichumLei Cai 2010-11-12
（13）Colletotrichum from Asian fruitsLei Cai 2010-08-01
（14）Phylogenetic relationships of Podospora and allied genera based on multi-gene sequences and morphologyLei Cai et al. 2005-07-30
（15）Molecular phylogeny of the Sordariaceae based on rDNA-ITS, rDNA-LSU and β-tubulin sequencesLei Cai et al. 2004-11-14
（16）Fungal communities on decaying bamboo culms (Phyllostachys bambusoides), variation in habitat and seasonLei Cai et al.2002-11-04


合作情况
项目协作单位1). Biosecurity Queensland,Department of Agriculture, Fisheries and Forestry, Australia
2). CBS-KNAW Fungal Biodiversity Centre, Utrecht, The Netherlands
3).Eastern Cereal and Oilseed Research Centre – Ottawa, Agriculture & Agri-Food Canada (AAFC), Ottawa, Canada
4).Department of Plant Biology and Pathology, Rutgers University,NJ, USA

指导学生已指导学生
张珂**
张宇**
周楠**
现指导学生
高雅慧**
蒋佳芮**
李英明**
王梅**
周欣**
侯玲伟**
张志锋**
周士越**
齐晓华**
王蒙蒙**