刘永胜


性别：
男
专业名称：
果树学

研究方向：
番茄、猕猴桃基因组和功能基因组学研究；果实发育表观遗传；次生代谢调控与品质改良的基因工程技术

技术职务：
教授

行政职务：


办公电话：


办公传真：


E-mail：
liuyongsheng1122ahau.edu.cn

实验室主页：


通讯地址：


邮政编码：

1994 四川农业大学博士学位
1995.01-1997.01 中科院植物研究所副研究员
1997.02-1998.09 中科院植物研究所研究员
1998.10-2000.12 以色列希伯来大学访问研究
2001.01-2004.03 美国康乃尔大学访问研究
2004.04-2005.03 美国洛克菲勒大学访问研究
2005.04-2011.05 四川大学生命科学院教授/博导/985平台主任
2011.06-2018.03 合肥工业大学生物与食品工程学院教授/博导/院长
2018.04- 安徽农业大学园艺学院教授/博导

　主讲课程：

分子生物学

　科研情况：

国家****科学基金：番茄质体分裂和品质发育的分子调控网络研究（**），2009-2012
转基因生物新品种培育重大专项重点课题：西南地区抗水稻胁迫因子基因克隆及功能验证（2009ZX08009-072B），2009-2013
国家自然基金面上项目：水稻Δ1-吡咯啉-5-羧酸腐胺代谢相关基因分离和功能分析（**），2009-2012
国家自然基金面上项目：番茄泛素连接酶CUL4-DDB1调控DNA甲基化的分子机理（**），2012-2015
国家基金面上项目：猕猴桃维生素C高效合成与积累的分子机理研究 （**）2015-2018
国家基金委中以国际合作项目：腐生病原真菌扩展青霉菌Penicillium expansum的效应蛋白挖掘及其功能鉴定（） 2014-2017
国家自然基金面上项目：番茄DNA甲基转移酶调控果实质体发育和品质形成的分子机理研究（**）2017-2020
国家自然基金面上项目：SYT-like蛋白与PeLysM2致病效应子互作调控宿主免疫应答的分子机理（**）2020-2023

　获奖情况：

1997 中国科学院青年科学家奖
2008 国家****科学基金
2009 四川省学术技术带头人
2011 国家科技进步二等奖：高异交性优质香稻不育系川香29A的选育及应用
2011 中华农业科技奖一等奖：高配合力水稻不育系803A的选育及其应用

　论文论著：

2020年Yue J, Liu J, Tang W, Wu YQ, Tang X, Li W, Yang Y, Wang L, Huang S, Fang C, Zhao K, Fei Z*, Liu Y*, Zheng Y* (2020) Kiwifruit Genome Database (KDG): a comprehensive resource for kiwifruit genomics. Horticulture Research 7: 117
Feder A, Jensen S, Wang A, Courtney L, Middleton L, Van Eck J, Liu Y, James Giovannoni J* (2020) Tomato fruit as a model for tissue-specific gene silencing in crop plants. Horticulture Research 7:142
Fan Y, Niu X, Huang L, Gross R, Lu H, Hawkins M, Yuan Y, Miao M, Liu Y*, Xiao F* (2020) A novel BSD domain-containing transcription factor controlling vegetative growth, leaf senescence and fruit quality in tomato. Journal of Experimental Botany (doi/10.1093/jxb/eraa393/**)
Hong X, Fang C, Liu Y*, Huang S* (2020) The complete chloroplast genome of Akebia trifoliata (Lardizabalaceae), a traditional herb in China. Mitochondrial DNA Part B 5: 2330-2331
Chen D, Li G, Liu J, Wisniewski M, Droby S, Levin E, Huang S*, Liu Y* (2020) Multiple transcriptomic analyses and characterization of pathogen-related core effectors and LysM family members reveal their differential roles in fungal growth and pathogenicity in Penicillium expansum. Molecular Genetics and Genomics 295:1415-1429 (doi.10.1007/s00438-020-01710-9)
Pan W, Zheng P, Zhang C, Wang W, Li Y, Fan T, Liu Y*, Cao S* (2020) The effect of ABRE BINDING FACTOR 4-mediated FYVE1 on salt stress tolerance in Arabidopsis. Plant Science (doi.org/10.1016/j.plantsci.2020.110489)
Chen Y,Su D,Li J,Ying S,Deng H, He X, Zhu Y, Li Y, Chen Y, Pirrello J, Bouzayen M, Liu Y,Liu M* (2020) Overexpression of SlbHLH95, a basic helix-loop-helix transcription factor family member, impacts trichome formation via regulating gibberellin biosynthesis in tomato. Journal of Experimental Botany 71:3450-3462 (doi.org/10.1093/jxb/eraa114)
Yue J, Wang R, Ma X, Liu JY, Lu X, Thakar SB, An N, Liu J, Xia E*, Liu Y* (2020) Full-length transcriptome sequencing provides insights into the evolution of apocarotenoid biosynthesis inCrocus sativus. Computational and Structural Biotechnology Journal 18:774-783 (doi.org/10.1016/j.csbj.2020.03.022)
Liang Q, Deng H, Li Y, Liu Z, Shu P, Fu R, Zhang Y, Pirrello J, Zhang Y, Grierson D, Bouzayen M, Liu Y*, Liu M* (2020) Like Heterochromatin Protein 1b represses fruit ripening via regulating the H3K27me3 levels in ripening-related genes in tomato. New Phytologist 227:485-497 (doi.org/10.1111/nph.16550)
Li H, Tang W, Liu K, Zhang L, Tang X, Miao M*, Liu Y* (2020) First report ofFusarium fujikuroicausing a brown leaf spot on kiwifruit. Plant Disease 104:1560 (doi.org/10.1094/PDIS-10-19-2112-PDN)
Yao N, Wang Z, Song ZJ, Wang L, Liu Y, Bao Y*, Lu BR* (2020) Origins of weedy rice revealed by polymorphisms of chloroplast DNA-sequences and nuclear microsatellites. Journal of Systematics and Evolution (DOI:10.1111/jse.12565)
2019年Tang W, Sun X, Yue J, Tang X, Jiao C, Yang Y, Niu X, Miao M, Zhang D, Huang S, Shi W, Li M, Fang C, Fei Z*, Liu Y* (2019) Chromosome-scale genome assembly of kiwifruit Actinidia eriantha with single-molecule sequencing and chromatin interaction mapping. GigaScience 8:1-10 doi: 10.1093/gigascience/giz027
Hua C, Kai K, Bi W, Shi W, Liu Y, Zhang D* (2019) Curcumin Induces Oxidative Stress inBotrytis cinerea, Resulting in a Reduction in Gray Mold Decay in Kiwifruit. Journal of Agric Food Chem 67: 7968-7976
Liu J, Liu L, Guo W, Fu M, Yang M, Huang S, Zhang F*, Liu Y* (2019) A new methodology for sensory quality assessment of garlic based on metabolomics and an arti ? cial neural network. RSC Advances 9: 17754-17765
Wang L, Tang W*, Hu Y, Zhang Y, Sun J, Guo X, Lu H, Yang Y, Fang C, Niu X, Yue J, Fei Z, Liu Y* (2019) A MYB/bHLH complex regulates tissue-speci?c anthocyanin biosynthesis in the inner pericarp of red-centered kiwifruit Actinidia chinensis cv. Hongyang. Plant Journal 99: 359-378
Levin E, Kishore A, Ballester AR, Raphael G, Feigenberg O, Liu Y, Norelli J, Gonzalez-Candelas L, Wisniewski M, Droby S* (2019) Identi?cation of pathogenicity-related genes and the role of a subtilisin- related peptidase S8 (PePRT) in authophagy and virulence of Penicillium expansum on apples. Postharvest Biology and Technology 149：209-220
Kud J, Wang W, Gross R, Fan Y, Huang L, Yuan Y, Gray A, Duarte A, Kual JC, Caplan A, Goverse A, Liu Y, Dandurand LM*, Xiao F* (2019) The potato cyst nematode effector RHA1B is a ubiquitin ligase and uses two distinct mechanisms to suppress plant immune signaling. PLoS Pathogens 15(4): e**
Hua C, Kai K, Wang X, Shi W, Zhang D*, Liu Y (2019) Curcumin inhibits gray mold development in kiwifruit by targeting mitogen- activated protein kinase (MAPK) cascades in Botrytis cinerea. Postharvest Biology and Technology 151: 152-159
Wang A, Chen D, Ma Q, Rose JKC, Fei Z, Liu Y*, Giovannoni J* (2019) The tomato HIGH PIGMENT1/DAMAGED DNA BINDING PROTEIN 1 gene contributes to regulation of fruit ripening. Horticulture Research 6:15
Sheng Y, Yan X, Huang Y, Han Y, Zhang C, Ren Y, Fan T, Xiao F, Liu Y*, Cao S* (2019) The WRKY transcription factor, WRKY13,activatesPDR8expressiontopositivelyregulate cadmium tolerance in Arabidopsis. Plant Cell Environment 42: 891-903
Li HH, Yu S, Tang W, Miao M*, Liu Y* (2018) First report of Diaporthe passiflorae and Diaporthe nobilis causing a postharvest kiwifruit rot in Sichuan Province, China. Plant Disease 103:771

2018年Zhang Y, Tang W*, Wang L, Hu Y, Liu X, Liu Y* (2018) Ectopic expression of the kiwifruit (Actinidia chinensis) R1R2R3-MYB transcription factor AcMYB3R enhances drought and salinity tolerance in Arabidopsis thaliana. Journal of Integrative Agriculture 17: 60345-7
Liu J, Guo W, Yang M, Liu L, Huang S, Tao L, Zhang F*, Liu Y* (2018) Investigation of the dynamic changes in the chemical constituents of Chinese “ Laba ” garlic during traditional processing. RSC Advance 8:41872-41883
Ren Y,Miao M,Meng Y,Cao J,Fan T,Yue J,Xiao F,Liu Y*,Cao S* (2018) DFR1-mediatedinhibitionofprolinedegradationpathwayregulates drought and freezing tolerance in Arabidopsis. Cell Report 23: 3960-3974
Zhang D, Yue J, Hua C, Chen D, Han Y, Liu Y* (2018) Role of UV-damaged DNA-binding protein-1 (DDB1) in early response to Pseudomonas syringae pv. tomato DC3000 infection in tomato. Canada Journal Plant Pathology doi.org/10.1080/**.2018.**
Gong X, Zhang Z, Yue J, Tang W, Zeng Z, Niu X, Chen D, Sang X, Xiao F, He G*, Liu Y* (2018) Phenotypic characterization, fine mapping, and altered expression profile of Roses1 mutation that affects organ size and water loss through regulating stomatal density in rice. Crop Science 58:486-506
Liu J, Sui Y*, Chen H, Liu YQ, Liu Y* (2018) Proteomic analysis of kiwifruit in response to the postharvest pathogen, Botrytis cinerea. Frontiers Plant Science 9:158
Liu J, Huang S*, Niu X, Chen D, Chen Q, Tian L, Xiao F, Liu Y* (2018) Genome-wide identification and validation of new reference genes for transcript normalization in developmental and post-harvested fruits of Actinidia chinensis. Gene 645:1-6
Liu J, Ji F, Chen F, Guo W, Yang M, Huang S, Zhang F*, Liu Y* (2018) Determination of garlic phenolic compounds using supercritical ?uid extraction coupled to supercritical ?uid chromatography/tandem mass spectrometry. Journal Pharmaceutical Biomedical Analysis 159:513-523
Wang W,Fan Y,Niu X,Miao M,Kud J,Zhou B,Zeng L,Liu Y*,Xiao F* (2018) Functional analysis of the seven in absentia ubiquitin ligase family in tomato. Plant Cell Environment 41:689-703
Deng H,Pirrello J,Chen Y,Li N,Zhu S,Chirinos X,Bouzayen M,Liu Y,Liu M* (2018) A novel tomato F-box protein, SlEBF3, is involved in tuning ethylene signaling during plant development and climacteric fruit ripening. Plant Journal doi: 10.1111/tpj.13976
Li G, Chen D, Tang X*, Liu Y* (2018) Heterologous expression ofkiwifruit (Actinidia chinensis) GOLDEN2?LIKE homolog elevates chloroplast level andnutritional quality intomato (Solanum lycopersicum). Planta 247:1351-1362
Li H,Li Y,Deng H,Sun X,Wang A,Tang X,Gao Y,Zhang N,Wang L,Yang S,Liu Y*,Wang S* (2018) Tomato UV-B receptor SlUVR8 mediates plant acclimation to UV-B radiation and enhances fruit chloroplast development via regulating SlGLK2. Scientific Reports 8:6079
Yue J, Zhu C, Zhou Y, Niu X, Miao M, Tang X, Chen F, Zhao W*, Liu Y* (2018) Transcriptome analysis of differentially expressed unigenes involved in flavonoid biosynthesis during flower development of Chrysanthemum morifolium ‘Chuju’. Scientific Reports 8:13414
Feng G, Huang S*, Liu Y, Xiao F, Liu J, Zhang Z, Chen Q, Mao Y, Cao X, Wang Y, Chen D, Zhou Y, Yu F, Liu G, Liu Y, Niu X* (2018) The transcriptome analyses of Tagetes erecta provides novel insights into secondary metabolites biosynthesis during flower development. Gene 660: 18-27
2017年Yue J, Lu X, Zhang H, Ge J, Gao X*, Liu Y* (2017) Identification of conserved and novel microRNAs in blueberry. Frontiers in Plant Science doi: 10.3389/fpls.2017.01155
Yue J, Zhang D, Ban R, Ma X, Chen D, Li G, Liu J, Wisniewski M, Droby S, Liu Y* (2017) PCPPI: a comprehensive database for the prediction of Penicillium-crop protein-protein interactions. DATABASE 1-9 doi: 10.1093/database/baw170
Wei B, Zhang W, Chao J, Zhang T, Zhao T, Noctor G, Liu Y*, Han Y* (2017) Functional analysis of the role of hydrogen sulfide in the regulation of dark-induced leaf senescence in Arabidopsis. Scientific Reports 7:2615 doi: 10.1038/s41598-017-02872-0
Yang L, Fan T, Guan L, Ren Y, Han Y, Liu Q, Liu Y, Cao S* (2017) CMDH4 encodes a protein that is required for lead tolerance in Arabidopsis. Plant Soil 412:317-330
Xue W, Yang Q, Chen Y, Zou R, Xing D, Xu Y, Liu Y, Wang H* (2017) Kiwifruit alleviates learning and memory deficits induced by Pb through antioxidation and inhibition of microglia activation in vitro and in vivo. Oxidative Medicine and Cellular Longevity doi.org/10.1155/2017/**
Levin E, Ballester, AR, Raphael G, Feigenberg O, Liu Y, Norelli J, Gonzalez-Candelas L, Ma J, Dardick C, Wisniewski M, Droby S* (2017) Identification and characterization of LysM effectors in Penicillium expansum. PLoS ONE 12:e**
2016年Yue J, Xu W, Ban R, Huang S, Miao M, Tang X, Liu G, Liu Y* (2016) PTIR: Predicted Tomato Interactome Resource. Scitific Reports 6:25047
Chen J, Yang L, Yan X, Liu Y, Wang R, Fan T, Ren Y, Tang X, Xiao F, Liu Y*, Cao S* (2016) Zinc-Finger transcription factor ZAT6 positively regulates Cadmium tolerance through glutathione-dependent pathway in Arabidopsis. Plant Physiology 171: 707–719
Zeng Z, Xiong F, Yu X, Gong X, Luo J, Jiang Y, Kuang H, Gao B, Niu X*, Liu Y* (2016) Overexpression of a glyoxalase gene, OsGly I, improves abiotic stress tolerance and grain yield in rice (Oryza sativa L.) Plant Physiology and Biochemistry 109: 62-71
Tang W, Zheng Y, Dong J, Yu J, Yue J, Liu F, Guo X, Huang S, Wisniewski M, Sun J, Niu X, Ding J, Liu J, Fie Z, Liu Y* (2016) Comprehensive Transcriptome Profiling Reveals Long Noncoding RNA Expression and Alternative Splicing Regulation during Fruit Development and Ripening in Kiwifruit (Actinidia chinensis). Frontiers in Plant Science 7:335
Miao M, Niu X, Kud J, Avila J, Devarenne T, Kuhl J, Liu Y* Xiao F* (2016) The ubiquitin ligase SEVEN IN ABSENTIA (SINA) ubiquitinates a defense-related NAC transcription factor and negatively regulates cell death signaling. New Phytologist 211:138-150
Cheng Z, Chi M, Li G, Chen H, Sui Y, Sun H, Wisniewski M, Liu Y, Liu J* (2016) Heat shock improves stress tolerance and biocontrol performance of Rhodotorula mucilaginosa. Biological Control 95: 49-56
Tang X, Miao M, Niu X, Zhang D, Cao X, Jin X, Zhu Y, Fan Y, Wang H, Liu Y, Sui Y, Wang W, Wang A, Xiao F, Giovannoni J, Liu Y* (2016) Ubiquitin-conjugated Degradation of Golden 2-Like Transcription Factor is mediated by CUL4-DDB1-based E3 Ligase Complex in Tomato. New Phytologist 209: 1028-1039
Li Y, Miao M, Deng H, Li H, Huang S, Wang S, Liu Y* (2016) Tomato MBD5, a methyl CpG binding domain protein, physically interacting with UV-damaged DNA binding protein-1, functions in multiple processes. New Phytologist 210:208-26
2015年Liu F, Guo X, Yao Y, Tang W, Zhang W, Cao S, Han Y*, Liu Y* (2015) Cloning and function characterization of two dehydroascorbate reductases from kiwifruit (Actinidia chinensis L.) Plant Molecular Biology Reports 34: 815-826
Zhang D, Wang H, Hu Y, Liu Y* (2015) Chitosan controls postharvest decay on cherry tomato fruit possibly via the mitogen-activated protein kinase signaling pathway. Journal of Agicultural and Food Chemistry 63:7399-7404
Yue J, Ma X, Ban R, Huang Q, Wang W, Liu J, Liu Y* (2015) FR database 1.0: a resource focused on fruit development and ripening. DATABASE (Oxford) doi: 10.1093/database/bav002
Chen J, Yang L, Gu J, Bai X, Ren Y, Fan T, Han Y, Jiang L, Xiao F, Liu Y*, Cao S* (2015) MAN3 gene regulates cadmium tolerance through the glutathi- one-dependent pathway in Arabidopsis thaliana. New Phytologist 205:570-582
Yue J, Liu J, Ban R, Tang W, Deng L, Fei Z, Liu Y* (2015) Kiwifruit Information Resource (KIR): a comparative platform for kiwifruit genomics. DATABASE doi: 10.1093/database/bav113
Zhu Y, Huang S, Miao M, Tang X, Yue J, Wang W, Liu Y* (2015) Genome-wide identification, sequence characterization, and protein–protein interaction properties of DDB1 (damaged DNA binding protein-1)-binding WD40-repeat family members in Solanum lycopersicum. Planta 241:1337-1350
Wang A, Yu X, Mao Y, Liu Y, Liu G, Liu Y*, Niu X* (2015) Overexpression of a small heat-shock-protein gene enhances tolerance to abiotic stresses in rice. Plant Breeding 134:384-393
Sun X, Gao Y, Zhang N, Li H, Yang S, Liu Y* (2015) SlSOM inhibits seed germination by regulating the expression of ABA/GA metabolic genes and SlABI5 in Solanum lycopersicum. Journal of Integrative Agriculture 14: 326-336
Yao N, Wang L, Yan H, Liu Y*, Lu BR* (2015) Mapping quantitative trait loci (QTL) determining seed-shattering in weedy rice: evolution of seed shattering in weedy rice through de-domestication. Euphytica 204:513-522
Sun X, Gao Y, Zhang N, Li H, Yang S, Liu Y* (2015) Over-expression of SlWRKY39 Leads to Enhanced Resistance to Multiple Stress Factors in Tomato. Journal of Plant Biology 58:11-9
Gao L, Yang S, Zhu Y, Zhang J, Zhuo M, Miao M, Tang X, Liu Y*, Wang S* (2015) The tomato DDI2, a PCNA ortholog, associating with DDB1-CUL4 complex is required for UV-damaged DNA repair and plant tolerance to UV stress. Plant Science 235:101-10
Zhang J, Tang W, Huang Y, Niu X, Zhao Y, Han Y*, Liu Y* (2015) Down-regulation of a LBD-like gene, OsIG1, leads to occurrence of unusual double ovules and developmental abnormalities of various floral organs and megagametophyte in rice. Journal of Experimental Botany 66:99-112
2014年Hu KD, Wang Q, Hu LY, Gao SP, Wu J, Li YH, Zheng JL, Han Y, Liu Y, Zhang H*. (2014) Hydrogen sulfide prolongs postharvest storage of fresh-cut pears (Pyrus pyrifolia) by alleviation of oxidative damage and inhibition of fungal growth. PLoS ONE 9(1):e85524
Zhao W, Wisniewski M, Wang W, Liu J*, Liu Y* (2014) Heat-induced oxidative injury contributes to inhibition of Botrytis cinerea spore germination and growth. Word Journal of Microbiology and Biotechnology 30: 951-957
Yue J, Wang WJ, Ban RJ, Zhu YY, Liu J, Liu Y* (2014) PAAS: Fast retrieval of plant amino acid substitutions and their effects on comparative phenomics. Plant Molecular Biology Reports 33:748-750
Cao Y, Hu S, Dai Q, Liu Y (2014) Tomato terpene synthases TPS5 and TPS39 account for a monoterpene linalool production in tomato fruits. Biotechnology Letters 36:1717-1725
Chen J, Yang l, Gu J, Bai X, Ren Y, Fan T, Han Y, Jiang L, Xiao F, Liu Y*, Cao S* (2014) MAN3 gene regulates cadmium tolerance through the glutathione-dependent pathway in Arabidopsis. New Phytologist 205:570-82
Yu J, Li Y, Tang W, Liu J, Lu BR, Liu Y* (2014) The accumulation of glycine betaine is dependent on choline monooxygenase (OsCMO), not on phosphoethanolamine N-methyltransferase (OsPEAMT1), in rice (Oryza sativa L. ssp. japonica). Plant Molecular Biology Reporter 36:916-922
Miao M, Zhu Y, Qiao M, Tang X, Zhao W, Xiao F, Liu Y* (2014) The tomato DWD motif-containing protein DDI1 interacts with the CUL4–DDB1-based ubiquitin ligase and plays a pivotal role in abiotic stress responses. Biochemical and Biophysical Research Communications 450: 1439-1445
Tang W, Sun J, Liu J, Liu F, Yan J, Gou X, Lu BR, Liu Y* (2014) RNAi-directed downregulation of betaine aldehyde dehydrogenase 1 (OsBADH1) results in decreased stress tolerance and increased oxidative markers without affecting glycine betaine biosynthesis in rice (Oryza sativa). Plant Molecular Biology 86:443-454
Niu X, Xiong F, Liu J, Sui Y, Zeng Z, Lu BR*, Liu Y* (2014) Co-expression of ApGSMT and ApDMT promotes biosynthesis of glycine betaine in rice (Oryza sativa L.) and enhances salt and cold tolerance. Environmental and Experimental Botany 104: 16-25
Sui Y, Droby S, Zhang D, Wang W, Liu Y* (2014) Reduction of Fusarium rot and maintenance of fruit quality in melon using eco-friendly hot water treatment. Environmental Science and Pollution Research 21:13956-63
2013年Liu J*, Sui Y, Wisniewski M, Droby S, Liu Y* (2013) Review: Utilization of antagonistic yeasts to manage postharvest fungal diseases of fruit. International Journal of Food Microbiology 167:153-160
Huang W, Miao M, Kud J, Niu X, Ouyang B, Zhang J, Ye Z, Kuhl JC Liu Y*, Xiao F* (2013) SlNAC1, a stress-related transcription factor, is fine-tuned on both transcriptional and post-translational levels. New Phytologist 197:1214-24
Tang X, Tang Z, Huang S, Liu J, Liu J, Shi W, Tian X, Li Y, Zhang D, Yang J, Gao Y, Zeng D, Hou P, Niu X, Cao Y, Li G, Li X, Xiao F, Liu Y* (2013) Whole transcriptome sequencing reveals genes involved in plastid/chloroplast division and development are regulated by the HP1/DDB1 at an early stage of tomato fruit development. Planta 238:923-936
Zhang P, Deng H, Xiao F, Liu Y* (2013) Alterations of alternative splicing patterns of Ser/Arg-rich (SR) genes in response to hormones and stresses treatments in different ecotypes of rice (Oryza sativa). Journal of Integrative Agriculture 12: 737-748
Zhang H, Niu X, Liu J, Xiao F, Cao S, Liu Y* (2013) RNAi-directed downregulation of vacuolar H-ATPase subunit A results in enhanced stomatal aperture and density in rice. PLoS ONE 8(7): e69046
Yu GR, Hou P, Liu Y, Liu YJ, Wang GY, Lin M, Xu LY, Xiao F, Liu Y* (2013) Optimization of Agrobacterium tumefaciens-mediated immature embryo transformation system and transformation of glyphosate-resistant gene 2mG2-EPSPS in maize (Zea mays L.). Journal of Integrative Agriculture 12：2134-2142
Ga SP, Hu KD, Hu LY, Li YH, Han Y, Wang HL, Liu Y, Zhang H (2013) Hydrogen sulfide delays postharvest senescence and plays an antioxidative role in fresh-cut kiwifruit. Hort Science 48: 1385-1392
Gao Y, Liu J, Zhang Z, Sun X, Zhang N, Fan J, Niu X, Xiao F, Liu Y* (2013) Functional characterization of two alternatively spliced transcripts of tomato ABSCISIC ACID INSENSITIVE3 (ABI3) gene. Plant Molecular Biology 82:131-145
Lee DS, Chen LJ, Li CY, Liu Y, Tan XL, Lu BR, Li J, Gan SX, Kang SG, Suh HS, Zhu Y* (2013) The Bsister MADS Gene FST Determines Ovule Patterning and Development of the Zygotic Embryo and Endosperm. PLoS ONE 8:e58748
Huang S, Ding J, Deng D, Tang W, Sun H, Liu D, Zhang L, Niu X, Zhang X, Meng M, Yu J, Liu J, Han Y, Shi W, Zhang D, Cao S, Wei Z, Cui Y, Xia Y, Zeng H, Bao K, Lin L, Min Y, Zhang H, Miao M, Tang X, Zhu Y, Sui Y, Li G, Sun H, Yue J, Sun J, Liu F, Zhou L, Lei L, Zheng X, Liu M, Huang L, Song J, Xu C, Li J, Ye K, Zhong S, Lu BR, He G, Xiao F, Wang HL, Zheng H*, Fei Z*, Liu Y* (2013) Draft genome of the kiwifruit Actinidia chinensis. Nature Communications 4:2640
2012年Tomato Genome Consortium (2012) The tomato genome sequence provides insights into fleshy fruit evolution. Nature 485:635-641 (cover story)
Huang S, Gao Y, Liu J, Peng X, Niu X, Fei Z, Cao S*, Liu Y* (2012) Genome-wide analysis of WRKY transcription factors in Solanum lycopersicum. Molecular Genetics Genomics 287:495-513
Goyal RK, Kumar V, Shukla V, Mattoo R, Liu Y, Chung SH, Giovannoni JJ, Mattoo AK* (2012) Features of a unique intronless cluster of class I small heat shock protein genes in tandem with box C/D snoRNA genes on chromosome 6 in tomato (Solanum lycopersicum). Planta 235:453-471
Powell AT*, Nguyen CU, Hill T, Cheng KL, Figueroa-Balderas R, Aktas H, Ashrafi H, Pons C, Fernández-Muñoz R, Vicente A, Lopez-Baltazar J, Barry CS, Liu Y, Chetelat R, Granell-Richart A, Deynze AV, Giovannoni J*, Bennett AB (2012) Uniform ripening (U) encodes a Golden 2-like transcription factor regulating tomato fruit chloroplast development. Science 336:1711-1715
Feng Yuan-Yuan, Hou Pei, Li Ying-Nan, Liu Y* (2012) Bioinformatic Analysis and Subcellular Localization of Solanum lycopersicum ARF2. Progress in Biochemistry and Biophysics 39:51-58
Tang X, Liu J, Huang S, Shi W, Tang D, Niu X, Miao M, Xiao F*, Liu Y* (2012) Roles of UV-damaged DNA binding protein 1 (DDB1) in epigenetically modifying multiple traits of agronomic importance in tomato. Plant Signaling and Behavior 7:1529-1532
Liu J, Tang X, Gao L, Gao Y, Li Y, Huang S, Sun X, Miao M, Zeng H, Tian X, Niu X, Zheng L, Giovannoni J, Xiao F*, Liu Y* (2012) Role of tomato UV-damaged DNA binding protein 1 (DDB1) in organ size control via an epigenetic manner. PLoS ONE 7(8):e42621
Sang X, Li Y, Luo Z, Ren D, Fang L, Wang N, Zhao F, Ling Y, Yang Z, Liu Y, He G* (2012) CHIMERIC FLORAL ORGANS1, encoding a monocot-specific MADS box protein, regulates floral organ identity in rice. Plant Physiology 160:788-807
Liu J, Li H, Miao M, Tang X, Giovannoni J, Xiao F*, Liu Y* (2012) The tomato UV-damaged DNA-binding protein-1 (DDB1) is implicated in pathogenesis-related (PR) gene expression and resistance to Agrobacterium tumefaciens. Molecular Plant Pathology 13:123-134
Du X, Miao M, Ma X, Liu Y, Kuhl JC, Martin GB, Xiao F* (2012) Plant programmed cell death caused by an autoactive form of Prf is suppressed by co-expression of the Prf LRR domain. Molecular Plant 5:1058-1067
Yang S, Niu X, Luo D, Chen C, Yu X, Tang W, Lu BR, Liu Y* (2012) Functional characterization of an aldehyde dehydrogenase homologue in rice. Journal of Integrative Agriculture 11:1434-1444
Luo D, Niu X, Yu J, Yan J, Gou X, Lu BR, Liu Y* (2012) Rice choline monooxygenase (OsCMO) protein functions in enhancing glycine betaine biosynthesis in transgenic tobacco but does not accumulate in rice (Oryza sativa L. ssp. japonica). Plant Cell Reports 31:1625-1635.
Cao Y, Tang X, Giovannoni J, Xiao F, Liu Y* (2012) Functional characterization of a tomato COBRA-like gene functioning in fruit development and ripening. BMC Plant Biology 12:211
Hu LY, Hu SL, Wu J, Li YH, Zheng JL, Wei ZJ, Liu J, Wang HL, Liu Y, Zhang H* (2012) Hydrogen sulfide prolongs postharvest shelf life of strawberry and plays an antioxidative role in fruits. Journal of Agriculture and Food Chemistry 60:8684-8693
2010年Niu XL, Luo D, Gao SP, Ren GJ, Chang LJ, Zhou YK, Luo XL, Li YX, Hou P, Tang W, Lu BR, Liu Y* (2010) A conserved unusual posttranscriptional processing mediated by short, direct repeated (SDR) sequences in plants. Journal of Genetics and Genomics 37: 85-99
Gao SP, Niu XL, Luo D, Chang LJ, Yu X, Li YX, Liu Y* (2010) Application of tobacco transient expression system to detect gene splicing in higher plants. Progress in Biochemistry & Biophysics 37:662-670
2008年Niu XL, Tang W, Huang WZ, Ren GJ, Wang QL, Luo D, Xiao YY, Yang SM, Wang F, Lu BR, Gao FY, Lu TG, Liu Y* (2008) RNAi-directed downregulation of OsBADH2 results in aroma (2-acetyl-1-pyrroline) production in rice (Oryza sativa). BMC Plant Biology 8: 100
Huang WZ, Ma XR, Wang QL, Gao YF, Xue Y, Niu XL, Yu GR, Liu Y* (2008) Significant improvement of stress tolerance in tobacco plants by overexpressing a stress-responsive aldehyde dehydrogenase gene from maize (Zea mays). Plant Molecular Biology 68: 451-463
Wang SH, Liu JK, Feng YY, Niu XL, Giovannoni J, Liu Y* (2008) Altered plastid levels and potential for improved fruit nutrient content via down-regulation of the tomato DDB1 interacting protein CUL4. Plant Journal55: 89-103
2007年Fan J, Niu XL, Wang YG, Ren GJ, Zhuo T, Yang Y, Lu BR, Liu Y* (2007) Short, direct repeats (SDRs)-mediated posttranscriptional processing of a transcription factor gene OsVP1 in rice (Oryza sativa). Journal of Experimental Botany 58: 3811-3817
Luo D, Niu XL, Wang Y, Zheng WJ, Chang LJ, Wang QL Wei X, Yu G, Lu BR, Liu Y* (2007) Functional defect at rice choline monooxygenase (CMO) locus from an unusual post-transcriptional processing associated with the sequence elements of short direct repeats. New Phytologist 175: 439-447
Niu XL, Zheng WJ, Lu BR, Ren GJ, Huang WZ, Wang SH, Liu JL, Tang ZZ, Luo D, Wang YG, Liu Y*（2007）An unusual post-transcriptional processing in two betaine aldehyde dehydrogenase (BADH) loci of cereal crops directed by short-direct repeats in response to stress conditions. Plant Physiology 143: 1229-1242
2004年
Fridman E, Carrari F, Liu Y, Fernie A and Zamir D* (2004). Zooming-in on a quantitative trait nucleotide (QTN) for tomato yield using wild species introgression lines. Science 305: 1786-1789
Liu Y, Roof S, Ye Z, Barry C, van Tuinen A, Vrebalov J, Bowler C and Giovannoni J* (2004) Manipulation of light signal transduction as a means of modifying fruit nutritional quality in tomato. Proceedings of National Academy of Science of the United States of America 101: 9897-9902
2003年Carmel-Goren L, Liu Y, Eliezer L and Zamir D* (2003). The SELF-PRUNING gene family in tomato. Plant Molecular Biology 52: 1215-1222
Liu Y, Gur A, Ronen G, Causse M, Damidaux R, Buret M, Hirschberg J and Zamir D* (2003). There is more to tomato fruit color than candidate carotenoid genes. Plant Biotechnology Journal 1: 195-207
2002年Fridman E, Liu Y, Carmel-Goren L, Gur A, Shoresh M, Pleban T, Eshed Y, Zamir D* (2002). Two tightly linked QTLs modify tomato sugar content via different physiological pathways. Molecular Genetics Genomics 266:821-826
2001年Liu Y, Zhu LH*, Sun JS, Chen Y (2001) Mapping QTLs for female gametophyte development in an inter-subspecific cross in Oryza sativa L. Theoretical Applied Genetics 102: 1243-1251
2000年Pan Q, Liu Y, Budai-Hadrian O, Sela M, Carmel-Goren L, Zamir D, Fluhr R* (2000). Comparative genetics of nucleotide binding site-leucine rich repeat resistance gene homologues in the genomes of two dicotyledons: tomato and arabidopsis. Genetics 155: 309-322.
Bai S, Liu Y*, Sun J, Zhu L (2000) Molecular mapping of split rice spikelet mutant srs-1and analysis of its homeotic function in rice. Science in China Series C-Life Sciences 43: 369-375
1997年Liu Y, Zhu L, Sun J, Shen L, Wang Y, He P, Lu C, Chen Y (1997) Genetic mapping of female sterility derived from subspecies hybridization of rice. Science in China Series C-Life Sciences 27(5):421-425