Zhao, HL; Zhang, C; Wu, YL; Zhang, XY; Rong, QY; Xu, Z; Ding, YF; Li, Y
; Du, ZZ; Zhou, XZ; Li, BQ; Ji, XF发表期刊INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
ISSN1466-5026
2019-06
卷号69期号:6页码:1794-1799
关键词marine sedimentpolyphasic taxonomicnovel genusThalassorhabdomicrobium marinisediminis gen. nov., sp. nov.
研究领域Microbiology
DOI10.1099/ijsem.0.003394
产权排序[Zhao, Huilin; Wu, Yulong; Rong, Qianyu; Xu, Zheng; Ding, Yunfei; Du, Zhenzhen; Zhou, Xiuzhi; Li, Boqing; Ji, Xiaofei] Binzhou Med Univ, Sch Basic Med Sci, Dept Pathogen Biol, Yantai, Peoples R China; [Zhang, Cong] Qingdao Agr Univ, Sch Life Sci, Shandong Prov Key Lab Appl Mycol, Qingdao, Shandong, Peoples R China; [Zhang, Xiying] Shandong Univ, Marine Biotechnol Res Ctr, State Key Lab Microbial Technol, Jinan, Shandong, Peoples R China; [Li, Yan] Chinese Acad Sci, Yantai Inst Coastal Zone Res, Key Lab Coastal Biol & Utilizat, Yantai, Peoples R China
通讯作者Li, Boqing(sdliboqing@163.com); Ji, Xiaofei(jxf_email@126.com)
作者部门海岸带生物学与生物资源保护实验室
英文摘要A novel Gram-stain-negative bacterium, designated strain BH-SD16(T), was isolated from a marine sediment sample collected in the Bohai Sea. Cells of strain BH-SD16(T) are aerobic, non-flagellated oval-shaped rods, showing oxidase- and catalase-positive activities. Growth occurs between 15-45 degrees C (optimum, 30 degrees C), at pH 6.0-9.0 (pH 7.0-7.5) and with 1-10 % (w/v) NaCl (3.0 %). Strain BH-SD16(T) contains C-18(:1)omega 7c (49.2 %), C-16:0 (1 7.7 %) and C-18(:1)omega 7c 11-methyl (16.6 %) as the predominant fatty acids and ubiquinone-10 as the major respiratory quinone. The major polar lipids comprise phosphatidylglycerol, phosphatidylcholine, phosphatidylethanolamine, diphosphatidylglycerol and two glycolipids. The size of the draft genome is 3 442 538 bp, including 3213 protein-coding genes, 40 tRNA genes and three rRNA genes, and the DNA G+C content is 63.4 mol%. Strain BH-SD16(T) shows the highest 16S rRNA gene sequence similarity to Pseudooctadecabacter jejudonensis (95.7 %), strains of the genus Octadecabacter (95.4-95.6 %) and strains of the genus Loktanella (93.8-95.4 %). Phylogenetic trees based on 16S rRNA gene sequences show that strain BH-SD16 1 forms a distinct lineage within the family Hyphomonadaceae, which is also confirmed in the multigenic phylogenetic tree calculated by RAxML. Based on the results of phenotypic, chemotaxonomic and phylogenetic analysis, strain BH-SD16(T) is considered to represent a novel genus and species in the family Hyphomonadaceae, for which the name Thalassorhabdomicrobium marinisediminis gen. nov., sp. nov. is proposed. The type strain is BH-SD16(T) (=CCTCC AB 2017073(T)=KCTC 6220(T)).
文章类型Article
资助机构National Natural Science Foundation of ChinaNational Natural Science Foundation of China [81702054, 81672044, 81501718, 81471561]; Natural Science Foundation of Shandong ProvinceNatural Science Foundation of Shandong Province [ZR2017BC011]; Science and Technology Program of Shandong Province [J15LK02]; Scientific Research Project of Yantai [2016ZH081]
收录类别SCI
语种英语
关键词[WOS]MAXIMUM-LIKELIHOOD; OCTADECABACTER; SEQUENCES; GENOMES
研究领域[WOS]Microbiology
WOS记录号WOS:000470080200039
引用统计
文献类型期刊论文
条目标识符http://ir.yic.ac.cnhttp://ir.yic.ac.cn/handle/133337/24931
专题海岸带生物学与生物资源利用重点实验室_海岸带生物学与生物资源保护实验室
作者单位1.Binzhou Med Univ, Sch Basic Med Sci, Dept Pathogen Biol, Yantai, Peoples R China;
2.Qingdao Agr Univ, Sch Life Sci, Shandong Prov Key Lab Appl Mycol, Qingdao, Shandong, Peoples R China;
3.Shandong Univ, Marine Biotechnol Res Ctr, State Key Lab Microbial Technol, Jinan, Shandong, Peoples R China;
4.Chinese Acad Sci, Yantai Inst Coastal Zone Res, Key Lab Coastal Biol & Utilizat, Yantai, Peoples R China
推荐引用方式
GB/T 7714Zhao, HL,Zhang, C,Wu, YL,et al. Thalassorhabdomicrobium marinisediminis gen. nov., sp. nov., a member of the family Hyphomonadaceae isolated from the Bohai Sea[J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY,2019,69(6):1794-1799.
APAZhao, HL.,Zhang, C.,Wu, YL.,Zhang, XY.,Rong, QY.,...&Ji, XF.(2019).Thalassorhabdomicrobium marinisediminis gen. nov., sp. nov., a member of the family Hyphomonadaceae isolated from the Bohai Sea.INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY,69(6),1794-1799.
MLAZhao, HL,et al."Thalassorhabdomicrobium marinisediminis gen. nov., sp. nov., a member of the family Hyphomonadaceae isolated from the Bohai Sea".INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY 69.6(2019):1794-1799.
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