Yi LAN
兰奕
PhD in Life Science
The Hong Kong University of Science and Technology, 2020

Research Assistant Professor
Department of Ocean Science



wylan@ust.hk
Room 3641

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ORCID
0000-0001-5501-1063

Scopus ID
57194390372




Research Interest Publications Projects




Research Interest

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Marine genomics and proteomics



Publications

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All Years 16 2022 0 2021 5 2020 2 2019 3 2018 2 2017 3 2016 1

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2021 5

Discovery, Bioactivity Evaluation, Biosynthetic Gene Cluster Identification, and Heterologous Expression of Novel Albofungin Derivatives
Frontiers in Microbiology, v. 12, February 2021, article number 635268
She, Weiyi; Ye, Wenkang; Cheng, Aifang; Liu, Xin; Tang, JianWei; Lan, Yi; Chen, Feng; Qian, Peiyuan Article
Genomic signatures supporting the symbiosis and formation of chitinous tube in the deep-sea tubeworm Paraescarpia echinospica
Molecular Biology and Evolution, v. 38, (10), October 2021, article number msab203, p. 4116-4134
Sun, Yanan; Sun, Jin; Yang, Yi; Lan, Yi; Ip, Jack Cho Ho; Wong, Wai Chuen; Kwan, Yick Hang; Zhang, Yanjie; Han, Zhuang; Qiu, Jian Wen; Qian, Peiyuan Article
Hologenome analysis reveals dual symbiosis in the deep-sea hydrothermal vent snail Gigantopelta aegis
Nature Communications, v. 12, (1), February 2021, article number 1165
Lan, Yi; Sun, Jin; Chen, Chong; Sun, Yanan; Zhou, Yadong; Yang, Yi; Zhang, Weipeng; Li, Runsheng; Zhou, Kun; Wong, Wai Chuen; Kwan, Yick Hang; Cheng, Aifang; Bougouffa, Salim; Van Dover, Cindy Lee; Qiu, Jian-Wen; Qian, Peiyuan Article
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam
Molecular Biology and Evolution, v. 38, (2), February 2021, p. 502-518
Ip, Jack Chi-Ho; Xu, Ting; Sun, Jin; Li, Runsheng; Chen, Chong; Lan, Yi; Han, Zhuang; Zhang, Haibin; Wei, Jiangong; Wang, Hongbin; Tao, Jun; Cai, Zongwei; Qian, Peiyuan; Qiu, Jianwen Article
Insights into the vision of the hadal snailfish Pseudoliparis swirei through proteomic analysis of the eye
Proteomics, v. 21, (19), October 2021, article number 2100118
Yan, Guoyong; Lian, Chun-Ang; Lan, Yi; Qian, Peiyuan; He, Lisheng Article

2020 2

Exploring the Influence of Signal Molecules on Marine Biofilms Development
Frontier in Microbiology, v. 11, 13 November 2020, article number 571400
Wang, Ruojun; Ding, Wei; Long, Lexin; Lan, Yi; Tong, Haoya; Saha, Subhasish; Wong, Yue Him; Sun, Jin; Li, Yongxin; Zhang, Weipeng; Qian, Peiyuan Article
The Scaly-foot snail genome and implications for the origins of biomineralised armour
Nature Communications, v. 11, (1), 08 April 2020, article number 1657
Sun, Jin; Chen, Chong; Miyamoto, Norio; Li, Runsheng; Sigwart, Julia D.; Xu, Ting; Sun, Yanan; Wong, Wai Chuen; Ip, Jack C. H.; Zhang, Weipeng; Lan, Yi; Bissessur, Dass; Watsuji, Tomo-o; Watanabe, Hiromi Kayama; Takaki, Yoshihiro; Ikeo, Kazuho; Fujii, Nobuyuki; Yoshitake, Kazutoshi; Qiu, Jian-Wen; Takai, Ken; Qian, Peiyuan Article

2019 3

Gut Microbial Divergence between Two Populations of the Hadal Amphipod Hirondellea Gigas
Applied and Environmental Microbiology, v. 85, (1), 1 January 2019, article number e02032-18
Zhang, Weipeng; Watanabe, Hiromi Kayama; Ding, Wei; Lan, Yi; Tian, Renmao; Sun, Jin; Chen, Chong; Cai, Lin; Li, Yongxin; Oguri, Kazumasa; Toyofuku, Takashi; Kitazato, Hiroshi; Drazen, Jeffrey C.; Bartlett, Douglas; Qian, Peiyuan Article
Host-Symbiont Interactions in Deep-Sea Chemosymbiotic Vesicomyid Clams: Insights From Transcriptome Sequencing
Frontiers in Marine Science, v. 6, November 2019, article number 680
Lan, Yi; Sun, Jin; Zhang, Weipeng; Xu, Ting; Zhang, Yu; Chen, Chong; Feng, Dong; Wang, Hongbin; Tao, Jun; Qiu, Jian-Wen; Qian, Peiyuan Article
Signatures of Divergence, Invasiveness, and Terrestrialization Revealed by Four Apple Snail Genomes
Molecular Biology and Evolution, v. 36, (7), July 2019, p. 1507-1520
Sun, Jin; Mu, Huawei; Ip, C.H. Jack; Li, Runsheng; Xu, Ting; Accorsi, Alice; Alvarado, Sánchez; Ross, Eric; Lan, Yi; Sun, Yanan; Castro-vazquez, Alfredo; Vega, Israel A.; Heras, Horacio; Ituarte, Santiago; Bocxlaer, Bert Van; Hayes, Kenneth A.; Cowie, Robert H.; Zhao, Zhongying; Zhang, Yu; Qian, Peiyuan; Qiu, Jian-Wen Article

2018 2

De novo transcriptome assembly and positive selection analysis of an individual deep-sea fish
BMC Genomics, v. 19, (1), May 2018, article number 394
Lan, Yi; Sun, Jin; Xu, Ting; Chen, Chong; Tian, Renmao; Qiu, Jian-Wen; Qian, Peiyuan Article
Genome Reduction in Psychromonas Species Within the Gut of an Amphipod From the Ocean's Deepest Point
mSystems, v. 3, (3), May-June 2018, article number e00009-18
Zhang, Weipeng; Tian, Renmao; Sun, Jin; Bougouffa, Salim; Ding Wei; Cai, Lin; Lan, Yi; Tong Haoya; Li Yongxin; Jamieson, Alan J.; Bajic, Vladimir B.; Drazen, Jeffrey C.; Bartlett, Douglas; Qian, Peiyuan Article

2017 3

Adaptation to Deep-sea Chemosynthetic Environments as Revealed by Mussel Genomes
Nature Ecology and Evolution, v. 1, (5), April 2017, article number 0121
Sun, Jin; Zhang, Yu; Xu, Ting; Zhang, Yang; Mu, Huawei; Zhang, Yanjie; Lan, Yi; Fields, J. Christopher; Hui, Jerome Ho Lam; Zhang, Weipeng; Li, Runsheng; Nong, Wenyan; Cheung, Fiona Ka Man; Qiu, Jian-Wen; Qian, Peiyuan Article
Comparative Transcriptomic Analysis Reveals Candidate Genes and Pathways Involved in Larval Settlement of the Barnacle Megabalanus Volcano
International Journal of Molecular Sciences, v. 18, (11), November 2017, article number 2253
Yan, Guoyong; Zhang, Gen; Huang, Jiaomei; Lan, Yi; Sun, Jin; Zeng, Cong; Wang, Yong; Qian, Peiyuan; He, Lisheng Article
Molecular Adaptation in the World's Deepest-living Animal: Insights From Transcriptome Sequencing of the Hadal Amphipod Hirondellea Gigas
Molecular Ecology, v. 26, (14), July 2017, p. 3732-3743
Lan, Yi; Sun, Jin; Tian, Renmao; Bartlett, Douglas H.; Li, Runsheng; Wong, Yue Him; Zhang, Weipeng; Qiu, Jian-Wen; Xu, Ting; He, Li-Sheng; Tabata, Harry Gene; Qian, Peiyuan Article

2016 1

The Deepest Mitochondrial Genome Sequenced from Mariana Trench Hirondellea Gigas (Amphipoda)
Mitochondrial DNA Part B: Resources, v. 1, (1), November 2016, p. 802-803
Lan, Yi; Sun, Jin; Bartlett, Douglas H.; Rouse, Greg W.; Tabata, Harry Gene; Qian, Peiyuan Article


Expand All Collapse All


Article 5

Discovery, Bioactivity Evaluation, Biosynthetic Gene Cluster Identification, and Heterologous Expression of Novel Albofungin Derivatives
Frontiers in Microbiology, v. 12, February 2021, article number 635268
She, Weiyi; Ye, Wenkang; Cheng, Aifang; Liu, Xin; Tang, JianWei; Lan, Yi; Chen, Feng; Qian, Peiyuan
Genomic signatures supporting the symbiosis and formation of chitinous tube in the deep-sea tubeworm Paraescarpia echinospica
Molecular Biology and Evolution, v. 38, (10), October 2021, article number msab203, p. 4116-4134
Sun, Yanan; Sun, Jin; Yang, Yi; Lan, Yi; Ip, Jack Cho Ho; Wong, Wai Chuen; Kwan, Yick Hang; Zhang, Yanjie; Han, Zhuang; Qiu, Jian Wen; Qian, Peiyuan
Hologenome analysis reveals dual symbiosis in the deep-sea hydrothermal vent snail Gigantopelta aegis
Nature Communications, v. 12, (1), February 2021, article number 1165
Lan, Yi; Sun, Jin; Chen, Chong; Sun, Yanan; Zhou, Yadong; Yang, Yi; Zhang, Weipeng; Li, Runsheng; Zhou, Kun; Wong, Wai Chuen; Kwan, Yick Hang; Cheng, Aifang; Bougouffa, Salim; Van Dover, Cindy Lee; Qiu, Jian-Wen; Qian, Peiyuan
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam
Molecular Biology and Evolution, v. 38, (2), February 2021, p. 502-518
Ip, Jack Chi-Ho; Xu, Ting; Sun, Jin; Li, Runsheng; Chen, Chong; Lan, Yi; Han, Zhuang; Zhang, Haibin; Wei, Jiangong; Wang, Hongbin; Tao, Jun; Cai, Zongwei; Qian, Peiyuan; Qiu, Jianwen
Insights into the vision of the hadal snailfish Pseudoliparis swirei through proteomic analysis of the eye
Proteomics, v. 21, (19), October 2021, article number 2100118
Yan, Guoyong; Lian, Chun-Ang; Lan, Yi; Qian, Peiyuan; He, Lisheng


Expand All Collapse All


Article 2

Exploring the Influence of Signal Molecules on Marine Biofilms Development
Frontier in Microbiology, v. 11, 13 November 2020, article number 571400
Wang, Ruojun; Ding, Wei; Long, Lexin; Lan, Yi; Tong, Haoya; Saha, Subhasish; Wong, Yue Him; Sun, Jin; Li, Yongxin; Zhang, Weipeng; Qian, Peiyuan
The Scaly-foot snail genome and implications for the origins of biomineralised armour
Nature Communications, v. 11, (1), 08 April 2020, article number 1657
Sun, Jin; Chen, Chong; Miyamoto, Norio; Li, Runsheng; Sigwart, Julia D.; Xu, Ting; Sun, Yanan; Wong, Wai Chuen; Ip, Jack C. H.; Zhang, Weipeng; Lan, Yi; Bissessur, Dass; Watsuji, Tomo-o; Watanabe, Hiromi Kayama; Takaki, Yoshihiro; Ikeo, Kazuho; Fujii, Nobuyuki; Yoshitake, Kazutoshi; Qiu, Jian-Wen; Takai, Ken; Qian, Peiyuan


Expand All Collapse All


Article 3

Gut Microbial Divergence between Two Populations of the Hadal Amphipod Hirondellea Gigas
Applied and Environmental Microbiology, v. 85, (1), 1 January 2019, article number e02032-18
Zhang, Weipeng; Watanabe, Hiromi Kayama; Ding, Wei; Lan, Yi; Tian, Renmao; Sun, Jin; Chen, Chong; Cai, Lin; Li, Yongxin; Oguri, Kazumasa; Toyofuku, Takashi; Kitazato, Hiroshi; Drazen, Jeffrey C.; Bartlett, Douglas; Qian, Peiyuan
Host-Symbiont Interactions in Deep-Sea Chemosymbiotic Vesicomyid Clams: Insights From Transcriptome Sequencing
Frontiers in Marine Science, v. 6, November 2019, article number 680
Lan, Yi; Sun, Jin; Zhang, Weipeng; Xu, Ting; Zhang, Yu; Chen, Chong; Feng, Dong; Wang, Hongbin; Tao, Jun; Qiu, Jian-Wen; Qian, Peiyuan
Signatures of Divergence, Invasiveness, and Terrestrialization Revealed by Four Apple Snail Genomes
Molecular Biology and Evolution, v. 36, (7), July 2019, p. 1507-1520
Sun, Jin; Mu, Huawei; Ip, C.H. Jack; Li, Runsheng; Xu, Ting; Accorsi, Alice; Alvarado, Sánchez; Ross, Eric; Lan, Yi; Sun, Yanan; Castro-vazquez, Alfredo; Vega, Israel A.; Heras, Horacio; Ituarte, Santiago; Bocxlaer, Bert Van; Hayes, Kenneth A.; Cowie, Robert H.; Zhao, Zhongying; Zhang, Yu; Qian, Peiyuan; Qiu, Jian-Wen


Expand All Collapse All


Article 2

De novo transcriptome assembly and positive selection analysis of an individual deep-sea fish
BMC Genomics, v. 19, (1), May 2018, article number 394
Lan, Yi; Sun, Jin; Xu, Ting; Chen, Chong; Tian, Renmao; Qiu, Jian-Wen; Qian, Peiyuan
Genome Reduction in Psychromonas Species Within the Gut of an Amphipod From the Ocean's Deepest Point
mSystems, v. 3, (3), May-June 2018, article number e00009-18
Zhang, Weipeng; Tian, Renmao; Sun, Jin; Bougouffa, Salim; Ding Wei; Cai, Lin; Lan, Yi; Tong Haoya; Li Yongxin; Jamieson, Alan J.; Bajic, Vladimir B.; Drazen, Jeffrey C.; Bartlett, Douglas; Qian, Peiyuan


Expand All Collapse All


Article 3

Adaptation to Deep-sea Chemosynthetic Environments as Revealed by Mussel Genomes
Nature Ecology and Evolution, v. 1, (5), April 2017, article number 0121
Sun, Jin; Zhang, Yu; Xu, Ting; Zhang, Yang; Mu, Huawei; Zhang, Yanjie; Lan, Yi; Fields, J. Christopher; Hui, Jerome Ho Lam; Zhang, Weipeng; Li, Runsheng; Nong, Wenyan; Cheung, Fiona Ka Man; Qiu, Jian-Wen; Qian, Peiyuan
Comparative Transcriptomic Analysis Reveals Candidate Genes and Pathways Involved in Larval Settlement of the Barnacle Megabalanus Volcano
International Journal of Molecular Sciences, v. 18, (11), November 2017, article number 2253
Yan, Guoyong; Zhang, Gen; Huang, Jiaomei; Lan, Yi; Sun, Jin; Zeng, Cong; Wang, Yong; Qian, Peiyuan; He, Lisheng
Molecular Adaptation in the World's Deepest-living Animal: Insights From Transcriptome Sequencing of the Hadal Amphipod Hirondellea Gigas
Molecular Ecology, v. 26, (14), July 2017, p. 3732-3743
Lan, Yi; Sun, Jin; Tian, Renmao; Bartlett, Douglas H.; Li, Runsheng; Wong, Yue Him; Zhang, Weipeng; Qiu, Jian-Wen; Xu, Ting; He, Li-Sheng; Tabata, Harry Gene; Qian, Peiyuan


Expand All Collapse All


Article 1

The Deepest Mitochondrial Genome Sequenced from Mariana Trench Hirondellea Gigas (Amphipoda)
Mitochondrial DNA Part B: Resources, v. 1, (1), November 2016, p. 802-803
Lan, Yi; Sun, Jin; Bartlett, Douglas H.; Rouse, Greg W.; Tabata, Harry Gene; Qian, Peiyuan


Expand All Collapse All


2016 1

The Deepest Mitochondrial Genome Sequenced from Mariana Trench Hirondellea Gigas (Amphipoda)
Mitochondrial DNA Part B: Resources, v. 1, (1), November 2016, p. 802-803
Lan, Yi; Sun, Jin; Bartlett, Douglas H.; Rouse, Greg W.; Tabata, Harry Gene; Qian, Peiyuan Article


No Publications









ProjectsFrom January 2020 to December 2022

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All Projects 2

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No Projects.
Explore the ultra-slowly expanding deep-sea hydrothermal vent systems


热液区可形成生物膜的菌群组成及其在硫化物矿化中的作用 Participating


Ministry of Science and Technology of the People's Republic of China


Project Team (HKUST)
LAN Yi


2020 - 2021




Microbiota in hadal biosphere and their biogeochemical effect and adaptation to the extreme environment


深渊生物学资源勘探、获取和开发的前沿技术体系研究-课题三：深渊微生物生命过程前沿科学研究 Participating


Ministry of Science and Technology of the People's Republic of China


Project Team (HKUST)
LAN Yi


2020 - 2021