教师介绍


宋勃升，博士，副教授，博士生导师，岳麓****。2015年博士毕业于华中科技大学。2013年11月至2015年5月在西班牙塞维利亚大学交流访问，师从欧洲科学院院士MarioJ.Pérez-Jiménez教授。入选2019年度中国博士后科学基金资助者选介（每年全国100人入选），湖南大学青年教师托举计划，获2019年ACMSIGBIO中国新星奖，IMCS学会2020年度最佳论文奖。2016年3月至2019年2月在华中科技大学从事博士后研究工作。2019年2月，湖南大学人才引进入职信息科学与工程学院。目前研究方向为生物计算、计算智能，图神经网络等，近5年在国际期刊和国际会议上发表相关领域学术论文50多篇，其中SCI收录30多篇，H指数17。担任IEEETrans.NanoBiosci.等20余个国际知名SCI期刊审稿人。每年担任BIC-TA，BICAS，HPCC等多个国际会议PCMember。主持国家级项目2项，省部级项目3项，参与国家级项目2项。

中文名： 宋勃升 英文名：
学历： 博士 职称： 副教授
联系电话： 电子邮件： boshengsong@hnu.edu.cn
研究方向： 生物计算，生物信息学，药物发现
联系地址： 湖南省长沙市岳麓区麓山南路2号，湖南大学信息科学与工程学院（410082）
所属机构： 计算机科学系 学院教师




学生培养
指导学生：
2019级硕士：苏祥、罗晓妍
2020级硕士：程玉、赖乐珊、李梓盟、李芬
2020级博士：李艳艳
招生计划：
本人招收2021年硕士研究生3-4名左右，学硕优先，课题组长期招收博士及博士后，欢迎感兴趣的学生与我联系。



科研状况
1. 国家自然科学基金面上项目，**，动态结构膜系统及应用研究，2020/01-2023/12，在研，主持
2. 中央高校基本科研业务费，5，生物计算理论与应用研究，2019/02-2023/12，在研，主持
3. 湖南省自然科学基金面上项目，2020JJ4215，树状结构膜系统理论及应用研究，2020/01-2021/12，在研，主持
4. 长沙市重点研发计划项目，kq**，膜计算系统理论及应用研究，2020/09-2022/08，在研，主持
5. 国家自然科学基金青年基金项目，**，基于细胞间通讯的膜计算系统与算法研究，2017/01-2019/12，已结题，主持
6. 中国博士后科学基金面上一等资助，2016M600592，基于细胞生化机理的通讯膜计算系统研究，2016/11-2019/01，已结题，主持
7. 中国博士后科学基金特别资助，2017T100554，通讯膜计算系统及其在生物学中的应用，2017/06-2019/01，已结题，主持



学术论文
一、SCI(E)收录论文
1.Bosheng Song, Fen Li, Yuansheng Liu, Xiangxiang Zeng, Deep learning methods for biomedical named entity recognition: a survey and qualitative comparison, Briefingsin Bioinformatics, 2021,https://doi.org/10.1093/bib/bbab282(SCI，IF=11.622,中科院一区top)
2.Yu Cheng, Yongshun Gong,Yuansheng Liu*,Bosheng Song*, Quan Zou, Molecular design in drug discovery: a comprehensive review of deep generativemodels,Briefings in Bioinformatics, 2021, in press.(SCI，IF=11.622, 中科院一区，顶刊)
3.Bosheng Song, Zimeng Li, Xuan Lin, Jianmin Wang, Tian Wang, Xiangzheng Fu, Pretraining model for biological sequence data, Briefings in Functional Genomics, 20(3), 181-195, 2021.
4.Bosheng Song, Shengye Huang, Xiangxiang Zeng, The computational power of monodirectional tissue P systems with symportrules, Information and Computation, 104751, 2021, DOI: https://doi.org/10.1016/j.ic.2021.104751.(SCI，EI，CCF A类期刊，理论计算机顶级期刊)
5. Yujie Chen, Tengfei Ma, Xixi Yang, Jianmin Wang, Bosheng Song*, Xiangxiang Zeng, MUFFIN: multi-scale feature fusion for drug–drug interaction prediction, Bioinformatics, 2021, DOI: 10.1093/bioinformatics/btab169
6.Bosheng Song, Kenli Li, Xiangxiang Zeng, Monodirectional evolutional symport tissue P systems with promoters andcell division, IEEE Transactions on Parallel and Distributed Systems, 2021, DOI: 10.1109/TPDS.2021.**. (SCI，CCF A类期刊)
7. Bosheng Song, Kenli Li, David Orellana-Martín, Mario J. Pérez-Jiménez, Ignacio Pérez-Hurtado, A survey of nature-inspired computing: membrane computing, ACM Computing Surveys, 2021, 54(1), 1-31. (SCI，IF=10.282, 中科院一区，顶刊)
8.Bosheng Song, Linqiang Pan, Rule synchronization for tissue P systems, Information and Computation, 104685, 2021, doi: https://doi.org/10.1016/j.ic.2020.104685.(SCI，EI，CCF A类期刊，理论计算机顶级期刊)
9.BoshengSong,XiangxiangZeng,AlfonsoRodríguez-Patón, MonodirectionaltissuePsystemswithchannelstates, InformationSciences,2021,546,206-219.(SCI，EI，IF=5.91, 中科院一区，顶刊)
10. Bosheng Song, Xiangxiang Zeng, Min Jiang, Mario J. Pérez-Jiménez, Monodirectional tissue P systems with promoters,IEEE Transactions on Cybernetics, 2021, 51(1), 438-450.(SCI，EI，IF=11.448, 中科院一区，顶刊)
11. Bosheng Song, Kenli Li, David Orellana-Martín, Luis Valencia-Cabrera, Mario J. Pérez-Jiménez, Cell-like P systems with evolutional symport/antiport rules and membrane creation, Information and Computation, 2020, 275, 104542. (SCI，EI，CCF A类，理论计算机顶级期刊)
12.Linqiang Pan, Artiom Alhazov, Housheng Su, Bosheng Song*, Local synchronization on asynchronous tissue P systems with symport/antiport rules, IEEE Transactions on NanoBioscience, 2020, 19(2), 315-320. (SCI，EI，JCR=3区)
13.Linqiang Pan, David Orellana-Martín, Bosheng Song*, Mario J. Pérez-Jiménez, Cell-like P systems with polarizations and minimal rules, Theoretical Computer Science, 2020, 816, 1-18. (SCI，EI，CCF B类，理论计算机传统权威期刊)
14. Linqiang Pan,Bosheng Song*,P systems with rule production and removal,Fundamenta Informaticae, 2020,171(1-4), 313-329. (SCI, EI，CCF C类期刊)
15. Bosheng Song, Yuan Kong, Solution to PSPACE-complete problem using P systems with active membranes with time-freeness,Mathematical Problems in Engineering, 2019, **.(SCI)
16. Linqiang Pan, Bosheng Song*, Atulya K. Nagar, K.G.Subramanian, Language generating alphabetic flat splicing P systems, Theoretical Computer Science, 2018, 724, 28-34. (SCI，EI，CCF B类，理论计算机传统权威期刊)
17.Linqiang Pan, Bosheng Song*, Luis Valencia-Cabrera, Mario J. Pérez-Jiménez, The computational complexity of tissue P systems with evolutional symport/antiport rules, Complexity, **, 2018.(SCI,JCR=2区)
18.Bosheng Song, Yingxin Hu, Henry N. Adorna, Fei Xu, A quick survey of tissue-like P systems, Romanian Journal of Information Science and Technology, 2018, 21(3), 310-321. (SCI)
19.Bosheng Song, Cheng Zhang, Linqiang Pan, Tissue-like P systems with evolutional symport/antiport rules, Information Sciences, 2017, 378, 177-193. (SCI，EI，IF=5.91, 中科院一区，2017年、2018年入选ESI高被引论文)
20.Bosheng Song, Tao Song, Linqiang Pan, A time-free uniform solution to subset sum problem by tissue P systems with cell division, Mathematical Structures in Computer Science, 2017, 27(1), 17-32. (SCI，EI，CCF B类, 2017年、2018年入选ESI高被引论文)
21.Bosheng Song, Mario J. Pérez-Jiménez, Linqiang Pan, An efficient time-free solution to QSAT problem using P systems with proteins on membranes, Information and Computation, 2017, 256, 287-299.(SCI，EI，CCF A类，理论计算机顶级期刊)
22.Linqiang Pan, Yanfeng Wang, Suxia Jiang, Bosheng Song*, Flat maximal parallelism in tissue P systems with promoters, Romanian Journal of Information Science and Technology, 2017, 20(1), 42-56.(SCI)
23.Bosheng Song, Linqiang Pan, Mario J.Pérez-Jiménez, Cell-like P systems with channel states and symport/antiport rules, IEEE Transactions on NanoBioscience, 2016, 15(6), 555-566. (SCI，EI)
24.Bosheng Song, Mario J. Pérez-Jiménez, Gheorghe Paun, Linqiang Pan, Tissue P systems with channel states working in the flat maximally parallel way, IEEE Transactions on NanoBioscience, 2016, 15(7), 645-656. (SCI，EI)
25. Bosheng Song, Mario J. Pérez-Jiménez, Linqiang Pan, An efficient time-free solutionto SAT problem by P systems with proteins on membranes, Journal of Computer and System Sciences, 2016, 82, 1090-1099. (SCI，EI，CCF B类)
26. Bosheng Song, Linqiang Pan, The computational power of tissue-like P systems with promoters, Theoretical Computer Science, 2016, 641, 43-52. (SCI，EI，CCF B类，理论计算机传统权威期刊)
27. Bosheng Song, Linqiang Pan, Mario J. Pérez-Jiménez, Tissue P systems with protein on cells, Fundamenta Informaticae, 2016, 144, 77-107. (SCI，EI)
28. Linqiang Pan, GheorghePaun, Bosheng Song*, Flat maximal parallelism in P systems with promoters, Theoretical Computer Science, 2016, 623, 83-91. (SCI，EI，CCF B类，理论计算机传统权威期刊)
29. Bosheng Song, Mario J. Pérez-Jiménez, Linqiang Pan, Computational efficiency and universality of timed P systems with membrane creation, Soft Computing, 2015, 19(11), 3043-3053. (SCI,JCR=2区)
30. Bosheng Song, Linqiang Pan, Computational efficiency and universality of timed P systems with active membranes, Theoretical Computer Science, 2015, 567, 74-86. (SCI，EI，CCF B类，理论计算机传统权威期刊)
31. Bosheng Song, Mario J. Pérez-Jiménez, Linqiang Pan, Efficient solutions to hard computational problems by P systems with symport/antiport rules and membrane division, BioSystems, 2015, 130, 51-58. (SCI, JCR=2区)
32. Bosheng Song, Tao Song, Linqiang Pan, Time-free solution to SAT problem by P systems with active membranes and standard cell division rules，Natural Computing, 2015, 14(4), 673-681. (SCI，EI)
二、中文论文
1.宋勃升，程玉，带膜分裂和促进剂的通讯膜系统求解QSAT问题，计算机科学，47(5)，2020，38-42.（CCF B类中文推荐期刊）
2.宋勃升，徐飞，通讯膜计算系统研究综述，广州大学学报，18(1)，2019，30-36.
3.谭钢军，宋勃升*，陈智华，石晓龙，单边插入--删除(膜)系统计算能力，系统工程理论与实践，33(9)，2013，2362-2370.