1.Annual periodicity in planktonic bacterial and archaeal community composition of eutrophic Lake Taihu

Li, JF, Zhang, JY, Liu, LY, Fan, YC, Li, LS, Yang, YF, Lu, ZH, Zhang, XG

SCIENTIFIC REPORTS[2045-2322], Published 2015, Volume 5,

收录情况： WOS

WOS核心合集引用:6 影响因子: 5.228 找找相关文章 PlumX Metrics

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2.dslice: an R package for nonparametric testing of associations with application in QTL and gene set analysis

Ye, C, Jiang, B, Zhang, XG, Liu, JS

BIOINFORMATICS[1367-4803], Published 2015, Volume 31, Issue 11, Pages 1842-1844

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影响因子: 5.766 找找相关文章 PlumX Metrics

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3.qDNAmod: a statistical model-based tool to reveal intercellular heterogeneity of DNA modification from SMRT sequencing data

Feng, ZX, Li, J, Zhang, JR, Zhang, XG

NUCLEIC ACIDS RESEARCH[0305-1048], Published 2014, Volume 42, Issue 22, Pages 13488-13499

收录情况： WOS SCOPUS

WOS核心合集引用:5 影响因子: 9.202 找找相关文章 PlumX Metrics

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4.Resolving the genetic heterogeneity of prelingual hearing loss within one family: Performance comparison and application of two targeted next generation sequencing approaches

Lu, Y, Zhou, XY, Jin, ZG, Cheng, J, Shen, WD, Ji, F, Liu, LY, Zhang, XG, Zhang, M, Cao, Y, Han, DY, Choy, KW, Yuan, HJ

JOURNAL OF HUMAN GENETICS[1434-5161], Published 2014, Volume 59, Issue 11, Pages 599-607

收录情况： WOS SCOPUS

WOS核心合集引用:5 影响因子: 2.487 找找相关文章 PlumX Metrics

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5.Exome Sequencing Identifies a Novel Frameshift Mutation of MYO6 as the Cause of Autosomal Dominant Nonsyndromic Hearing Loss in a Chinese Family

Cheng, J, Zhou, XY, Lu, Y, Chen, J, Han, B, Zhu, YH, Liu, LY, Choy, KW, Han, DY, Sham, PC, Zhang, MQ, Zhang, XG, Yuan, HJ

ANNALS OF HUMAN GENETICS[0003-4800], Published 2014, Volume 78, Issue 6, Pages 410-423

收录情况： WOS SCOPUS

影响因子: 1.889 找找相关文章 PlumX Metrics

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6.Improvement of Dscam homophilic binding affinity throughout Drosophila evolution

Wang, GZ, Marini, S, Ma, XY, Yang, Q, Zhang, XG, Zhu, Y

BMC EVOLUTIONARY BIOLOGY[1471-2148], Published 2014, Volume 14,

收录情况： WOS SCOPUS

影响因子: 3.406 找找相关文章 PlumX Metrics

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7.RNAseqViewer: visualization tool for RNA-Seq data

Roge, X, Zhang, XG

BIOINFORMATICS[1367-4803], Published 2014, Volume 30, Issue 6, Pages 891-892

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WOS核心合集引用:2 影响因子: 5.766 找找相关文章 PlumX Metrics

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8.MYH9-Related Disease: Description of a Large Chinese Pedigree and a Survey of Reported Mutations

Zhang, SF, Zhou, XY, Liu, SN, Bai, TT, Zhang, YG, Wang, J, Wang, SL, Zhang, XG, Wang, BB

ACTA HAEMATOLOGICA[0001-5792], Published 2014, Volume 132, Issue 2, Pages 193-198

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影响因子: 1.053 找找相关文章 PlumX Metrics

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9.Sequence signatures of genes with accompanying antisense transcripts in Saccharomyces cerevisiae

Li, YX, Liu, XN, Wang, XW, Zhang, XG

SCIENCE CHINA-LIFE SCIENCES[1674-7305], Published 2014, Volume 57, Issue 1, Pages 52-58

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WOS核心合集引用:1 影响因子: 2.297 找找相关文章 PlumX Metrics

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10.A Simulation Study on Gene Expression Regulation via Stochastic Model

Ye, C, Zhang, XG

2014 33RD CHINESE CONTROL CONFERENCE (CCC)[1948-9439], Published 2014, Pages 6885-6888

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11.Integrated omics study delineates the dynamics of lipid droplets in Rhodococcus opacus PD630

Chen, Yong, Ding, Yunfeng, Yang, Li, Yu, Jinhai, Zhang, Congyan, Huo, Chaoxing, Wang, Yang, Zhang, Huina, Zhang, Peng, Na, Huimin, Xu, Shimeng, Xie, Zhensheng, Yang, Fuquan, Liu, Pingsheng, Steinbüchel, Alexander, Toyoshi, Fujimoto, Simon, Cichello, Liu, Honglei, Wang, Xiaowo, Zhang, Xuegong, Zhang, Michael, Li, Yanda, Song, Lai, Zhang, Yue, Liu, Guiming, Wang, Xumin, Yu, Dan, Huo, Linhe, Wang, Guoliang, Fan, Zhonghua, Yu, Jun, Du, Yalan, Zhu, Yaxin, He, Tong

Nucleic Acids Research[0305-1048], Published 2014, Volume 42, Issue 2, Pages 1052-1064

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WOS核心合集引用:18 影响因子: 9.202 找找相关文章 PlumX Metrics

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12.Multiclass feature selection algorithms base on R-SVM

Xu, Qifeng, Zhang, Xuegong

2014 IEEE China Summit and International Conference on Signal and Information Processing, IEEE ChinaSIP 2014 - Proceedings, Published 2014, Pages 525-529

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13.Identifying potential cancer driver genes by genomic data integration

Chen, Y, Hao, JJ, Jiang, W, He, T, Zhang, XG, Jiang, T, Jiang, R

SCIENTIFIC REPORTS[2045-2322], Published 2013, Volume 3,

收录情况： WOS

WOS核心合集引用:16 影响因子: 5.228 找找相关文章 PlumX Metrics

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14.Network-based differential gene expression analysis suggests cell cycle related genes regulated by E2F1 underlie the molecular difference between smoker and non-smoker lung adenocarcinoma

Wu, C, Zhu, J, Zhang, XG

BMC BIOINFORMATICS[1471-2105], Published 2013, Volume 14,

收录情况： WOS SCOPUS

WOS核心合集引用:6 影响因子: 2.435 找找相关文章 PlumX Metrics

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15.Prioritizing genes responsible for host resistance to influenza using network approaches

Bao, SY, Zhou, XY, Zhang, LC, Zhou, J, To, KKW, Wang, BB, Wang, LQ, Zhang, XG, Song, YQ

BMC GENOMICS[1471-2164], Published 2013, Volume 14,

收录情况： WOS SCOPUS

WOS核心合集引用:1 影响因子: 3.867 找找相关文章 PlumX Metrics

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16.Opportunities and methods for studying alternative splicing in cancer with RNA-Seq

Feng, HJ, Qin, ZY, Zhang, XG

CANCER LETTERS[0304-3835], Published 2013, Volume 340, Issue 2, Pages 179-191

收录情况： WOS SCOPUS

WOS核心合集引用:19 影响因子: 5.992 找找相关文章 PlumX Metrics

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17.Computational prediction of associations between long non-coding RNAs and proteins

Lu, QS, Ren, SJ, Lu, M, Zhang, Y, Zhu, DH, Zhang, XG, Li, TT

BMC GENOMICS[1471-2164], Published 2013, Volume 14,

收录情况： WOS SCOPUS

WOS核心合集引用:23 影响因子: 3.867 找找相关文章 PlumX Metrics

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18.Alignment-free supervised classification of metagenomes by recursive SVM

Cui, HF, Zhang, XG

BMC GENOMICS[1471-2164], Published 2013, Volume 14,

收录情况： WOS SCOPUS

WOS核心合集引用:6 影响因子: 3.867 找找相关文章 PlumX Metrics

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19.NURD: an implementation of a new method to estimate isoform expression from non-uniform RNA-seq data

Ma, XY, Zhang, XG

BMC BIOINFORMATICS[1471-2105], Published 2013, Volume 14,

收录情况： WOS SCOPUS

WOS核心合集引用:7 影响因子: 2.435 找找相关文章 PlumX Metrics

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20.Identifying differentially spliced genes from two groups of RNA-seq samples

Wang, WC, Qin, ZY, Feng, ZX, Wang, X, Zhang, XG

GENE[0378-1119], Published 2013, Volume 518, Issue 1, Pages 164-170

收录情况： WOS SCOPUS

WOS核心合集引用:17 影响因子: 2.319 找找相关文章 PlumX Metrics

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21.Modeling kinetic rate variation in third generation DNA sequencing data to detect putative modifications to DNA bases

Schadt, Eric E., Keren-Paz, Alona, Chess, Andrew, Kasarskis, Andrew, Banerjee, Onureena, Kislyuk, Andrey O., Clark, Tyson A., Luong, Khai, Korlach, Jonas, Fang, Gang, Kumar, Vipin P., Feng, Zhixing, Wong, Winghung, Zhang, Xuegong, Chen-Plotkin, Alice S., Sondheimer, Neal J.

Genome Research[1088-9051], Published 2013, Volume 23, Issue 1, Pages 129-141

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WOS核心合集引用:28 影响因子: 11.351 找找相关文章 PlumX Metrics

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22.Improving cis-regulatory elements modeling by consensus scaffolded mixture models

Jiang, Hongshan, Zhao, Ying, Chen, Wenguang, Zheng, Weimin, Zhang, Xuegong

Science China Information Sciences[1674-733X], Published 2013, Volume 56, Issue 1, Pages 1-11

收录情况： WOS SCOPUS

影响因子: 0.885 找找相关文章 PlumX Metrics

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23.The fetal mouse is a sensitive genotoxicity model that exposes lentiviral-associated mutagenesis resulting in liver oncogenesis

Nowrouzi, Ali, Arens, Anne, Paruzynski, Anna, Schmidt, Manfred, Themis, Michael, Themes, Matthew, Thrasher, Adrian J., Holder, Maxine V., Bigger, Brian W., Montini, Eugenio, Andrews, Robert M., Cheung, Wing, Al-Allaf, Faisal A., Gregory, Lisa G., Dighe, Niraja, Ruthe, Alaine T., Coutelle, Charles C., Li, Tingting, Zhang, Xuegong, Waddington, Simon Nicholas, Buckley, Suzanne MK K, Osejindu, Emma, Reja, Safia, Roberts, Terry P., Newbold, Robert Frank, Von Kalle, Christof Von, Wang, Yoahe

Molecular Therapy[1525-0016], Published 2013, Volume 21, Issue 2, Pages 324-337

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WOS核心合集引用:8 影响因子: 6.938 找找相关文章 PlumX Metrics

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24.Detecting DNA Modifications from SMRT Sequencing Data by Modeling Sequence Context Dependence of Polymerase Kinetic

Feng, Zhixing, Zhang, Xuegong, Wong, Winghung, Fang, Gang, Korlach, Jonas, Clark, Tyson A., Luong, Khai, Schadt, Eric E.

PLoS Computational Biology[1553-734X], Published 2013, Volume 9, Issue 3,

收录情况： WOS SCOPUS

WOS核心合集引用:7 影响因子: 4.587 找找相关文章 PlumX Metrics

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25.Common variants in the ATP2B1 gene are associated with hypertension and arterial stiffness in Chinese population

Zhang, Xiaozhong, Zhang, Yi, Li, Yan, Gao, Pingjin, Zhu, Dingliang, Zhou, Xueya, Zhang, Xuegong, Wang, Xiaofeng, Jin, Li

Molecular Biology Reports[0301-4851], Published 2013, Volume 40, Issue 2, Pages 1867-1873

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WOS核心合集引用:7 影响因子: 1.698 找找相关文章 PlumX Metrics

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26.Short read mapping for exome sequencing

Zhou, Xueya, Zhang, Xuegong, Bao, Suying, Song, You-Qiang, Wang, Binbin

Methods in Molecular Biology[1064-3745], Published 2013, Volume 1038, Pages 93-111

收录情况： SCOPUS

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27.Identifying potential cancer driver genes by genomic data integration.

Chen, Yong, Hao, Jingjing, Jiang, Wei, Zhang, Xuegong, Jiang, Rui, He, Tong, Jiang, Tao

Scientific reports[2045-2322], Published 2013, Volume 3, Pages 3538

收录情况： SCOPUS

影响因子: 5.228 找找相关文章

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28.Comparison of metagenomic samples using sequence signatures

Jiang, B, Song, K, Ren, J, Deng, MH, Sun, FZ, Zhang, XG

BMC GENOMICS[1471-2164], Published 2012, Volume 13,

收录情况： WOS SCOPUS

WOS核心合集引用:24 影响因子: 3.867 找找相关文章 PlumX Metrics

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29.Integrating next-generation sequencing and traditional tongue diagnosis to determine tongue coating microbiome (vol 2, 936, 2012)

Jiang, B, Liang, XJ, Chen, Y, Ma, T, Liu, LY, Li, JF, Jiang, R, Chen, T, Zhang, XG, Li, S

SCIENTIFIC REPORTS[2045-2322], Published 2012, Volume 2,

收录情况： WOS

影响因子: 5.228 找找相关文章 PlumX Metrics

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30.Integrating next-generation sequencing and traditional tongue diagnosis to determine tongue coating microbiome

Jiang, B, Liang, XJ, Chen, Y, Ma, T, Liu, LY, Li, JF, Jiang, R, Chen, T, Zhang, XG, Li, S

SCIENTIFIC REPORTS[2045-2322], Published 2012, Volume 2,

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WOS核心合集引用:37 影响因子: 5.228 找找相关文章 PlumX Metrics

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31.Integrating gene expression and protein-protein interaction network to prioritize cancer-associated genes

Wu, C, Zhu, J, Zhang, XG

BMC BIOINFORMATICS[1471-2105], Published 2012, Volume 13,

收录情况： WOS SCOPUS

WOS核心合集引用:45 影响因子: 2.435 找找相关文章 PlumX Metrics

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32.Characterization and Prediction of Lysine (K)-Acetyl-Transferase Specific Acetylation Sites

Li, TT, Du, YP, Wang, LK, Huang, L, Li, WL, Lu, M, Zhang, XG, Zhu, WG

MOLECULAR & CELLULAR PROTEOMICS[1535-9476], Published 2012, Volume 11, Issue 1,

收录情况： WOS SCOPUS

WOS核心合集引用:4 影响因子: 5.912 找找相关文章 PlumX Metrics

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33.Pinpointing transcription factor binding sites from ChIP-seq data with SeqSite

Wang, X, Zhang, XG

BMC SYSTEMS BIOLOGY[1752-0509], Published 2011, Volume 5,

收录情况： WOS SCOPUS

WOS核心合集引用:3 影响因子: 2.208 找找相关文章 PlumX Metrics

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34.Network-based group variable selection for detecting expression quantitative trait loci (eQTL)

Wang, WC, Zhang, XG

BMC BIOINFORMATICS[1471-2105], Published 2011, Volume 12,

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WOS核心合集引用:3 影响因子: 2.435 找找相关文章 PlumX Metrics

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35.Observations on novel splice junctions from RNA sequencing data

Wang, LK, Wang, XW, Wang, X, Liang, YC, Zhang, XG

BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS[0006-291X], Published 2011, Volume 409, Issue 2, Pages 299-303

收录情况： WOS SCOPUS

WOS核心合集引用:9 影响因子: 2.371 找找相关文章 PlumX Metrics

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36.Meta-analysis of genome-wide association studies identifies common variants associated with blood pressure variation in east Asians

Kato, N, Takeuchi, F, Tabara, Y, Kelly, TN, Go, MJ, Sim, XL, Tay, WT, Chen, CH, Zhang, Y, Yamamoto, K, Katsuya, T, Yokota, M, Kim, YJ, Ong, RTH, Nabika, T, Gu, DF, Chang, LC, Kokubo, Y, Huang, W, Ohnaka, K, Yamori, Y, Nakashima, E, Jaquish, CE, Lee, JY, Seielstad, M, Isono, M, Hixson, JE, Chen, YT, Miki, T, Zhou, XY, Sugiyama, T, Jeon, JP, Liu, JJ, Takayanagi, R, Kim, SS, Aung, T, Sung, YJ, Zhang, XG, Wong, TY, Han, BG, Kobayashi, S, Ogihara, T, Zhu, DL, Iwai, N, Wu, JY, Teo, YY, Tai, ES, Cho, YS, He, J

NATURE GENETICS[1061-4036], Published 2011, Volume 43, Issue 6, Pages 530-U57

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WOS核心合集引用:243 影响因子: 31.616 找找相关文章 PlumX Metrics

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37.Sequence Alignment as Hypothesis Testing

Meng, L, Sun, FZ, Zhang, XG, Waterman, MS

JOURNAL OF COMPUTATIONAL BIOLOGY[1066-5277], Published 2011, Volume 18, Issue 5, Pages 677-691

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WOS核心合集引用:3 影响因子: 1.537 找找相关文章 PlumX Metrics

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38.Using non-uniform read distribution models to improve isoform expression inference in RNA-Seq

Wu, ZP, Wang, X, Zhang, XG

BIOINFORMATICS[1367-4803], Published 2011, Volume 27, Issue 4, Pages 502-508

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WOS核心合集引用:45 影响因子: 5.766 找找相关文章 PlumX Metrics

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39.Observations on shifted cumulative regulation

Ye, C, Liu, Y, Zhang, XG

GENOME BIOLOGY[1474-760X], Published 2011, Volume 12, Issue 4,

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40.Observations on potential novel transcripts from RNA-Seq data

Ye, Chao, Liu, Linxi, Wang, Xi, Zhang, Xuegong

Frontiers of Electrical and Electronic Engineering in China[1673-3460], Published 2011, Volume 6, Issue 2, Pages 275-282

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41.Elastic multiple kernel learning

Wu, ZhengPeng, Zhang, Xuegong

Zidonghua Xuebao/Acta Automatica Sinica[0254-4156], Published 2011, Volume 37, Issue 6, Pages 693-699

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42.Feature rescaling of support vector machines

Wu, ZhengPeng, Zhang, Xuegong

Tsinghua Science and Technology[1007-0214], Published 2011, Volume 16, Issue 4, Pages 414-421

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影响因子: 1.063 找找相关文章 PlumX Metrics

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43.基于拷贝数变异的遗传关联研究

周雪崖,张学工

科学通报[0023-074X], Published 2011, Issue 06, Pages 14-26

收录情况： CNKI

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44.ISOFORM ABUNDANCE INFERENCE PROVIDES A MORE ACCURATE ESTIMATION OF GENE EXPRESSION LEVELS IN RNA-SEQ

Wang, X, Wu, ZP, Zhang, XG

JOURNAL OF BIOINFORMATICS AND COMPUTATIONAL BIOLOGY[0219-7200], Published 2010, Volume 8, Pages 177-192

收录情况： WOS SCOPUS

WOS核心合集引用:19 影响因子: 0.785 找找相关文章 PlumX Metrics

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45.A Review on The Processing and Analysis of Next-generation RNA-seq Data

Wang, X, Wang, XW, Wang, LK, Feng, ZX, Zhang, XG

PROGRESS IN BIOCHEMISTRY AND BIOPHYSICS[1000-3282], Published 2010, Volume 37, Issue 8, Pages 834-846

收录情况： WOS SCOPUS

WOS核心合集引用:10 影响因子: 0.224 找找相关文章 PlumX Metrics

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46.Comparison of gene expression in hepatocellular carcinoma, liver development, and liver regeneration

Li, TT, Wan, BB, Huang, J, Zhang, XG

MOLECULAR GENETICS AND GENOMICS[1617-4615], Published 2010, Volume 283, Issue 5, Pages 485-492

收录情况： WOS SCOPUS

WOS核心合集引用:16 影响因子: 2.622 找找相关文章 PlumX Metrics

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47.Bioinformatics study indicates possible microRNA-regulated pathways in the differentiation of breast cancer

Pei, YF, Wang, ZM, Fei, F, Shao, ZM, Huang, W, Zhang, XG

CHINESE SCIENCE BULLETIN[1001-6538], Published 2010, Volume 55, Issue 10, Pages 927-936

收录情况： WOS SCOPUS

WOS核心合集引用:2 影响因子: 1.789 找找相关文章 PlumX Metrics

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48.DEGseq: an R package for identifying differentially expressed genes from RNA-seq data

Wang, LK, Feng, ZX, Wang, X, Wang, XW, Zhang, XG

BIOINFORMATICS[1367-4803], Published 2010, Volume 26, Issue 1, Pages 136-138

收录情况： WOS SCOPUS

WOS核心合集引用:726 影响因子: 5.766 找找相关文章 PlumX Metrics

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49.Identifying changed protein-protein interactions in biological processes by gene coexpression analysis

Zhang, Ting, Sun, Zhirong, Zhang, Xuegong

Chinese Science Bulletin[1001-6538], Published 2010, Volume 55, Issue 14, Pages 1396-1402

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影响因子: 1.789 找找相关文章 PlumX Metrics

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50.Predicted methylation landscape of all CpG islands on the human genome

Fan, Shicai, Zou, Jianxiao, Xu, Hongbing, Zhang, Xuegong

Chinese Science Bulletin[1001-6538], Published 2010, Volume 55, Issue 22, Pages 2353-2358

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影响因子: 1.789 找找相关文章 PlumX Metrics

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51.Global Network Analysis of Lipid-Raft-Related Proteins Reveals their Centrality in the Network and Their Roles in Multiple Biological Processes

Zhang, Ting, Sun, Zhirong, Zhang, Xuegong

Journal of Molecular Biology[0022-2836], Published 2010, Volume 402, Issue 4, Pages 761-773

收录情况： WOS SCOPUS

WOS核心合集引用:5 影响因子: 4.517 找找相关文章 PlumX Metrics

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52.生物信息学研究揭示乳腺癌组织分化中可能的microRNA调控通路

裴云飞,王志敏,费菲,邵志敏,黄薇,张学工

科学通报[0023-074X], Published 2010, Issue 08, Pages 28-36

收录情况： CNKI

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53.人类基因组CpG岛甲基化概况的预测

凡时财,邹见效,徐红兵,张学工

科学通报[0023-074X], Published 2010, Issue 14, Pages 33-41

收录情况： CNKI

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54.基础医学科研进展信息聚合平台构建

郝志勇,庄永龙,张学工

医学信息学杂志[1673-6036], Published 2010, Issue 06, Pages 19-22

收录情况： CNKI

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55.新一代高通量RNA测序数据的处理与分析

王曦,汪小我,王立坤,冯智星,张学工

生物化学与生物物理进展[1000-3282], Published 2010, Issue 08, Pages 24-36

收录情况： CNKI

影响因子: 0.224 找找相关文章

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56.The Microarray Quality Control (MAQC)-II study of common practices for the development and validation of microarray-based predictive models

Shi, Leming, Wen, Zhining, Shaughnessy, John D., Oberthuer, André, Thomas, Russell S., Paules, Richard S., Fielden, Mark, Barlogie, Bart, Du, Pan, Fischer, Matthias, Furlanello, Cesare, Ge, Xijin, Megherbi, Dalila B., Symmans, W Fraser, Zhang, John, Bushel, Pierre R., Chen, Minjun, Chou, Jeff, Dix, David J., Elloumi, Fathi, Hong, Huixiao, Judson, Richard, Lababidi, Samir, Li, Zhen, Lin, Simon M., Luo, Jun, Perkins, Roger G., Thierry-Mieg, Danielle, Thierry-Mieg, Jean, Zhou, Yiming, Berthold, Frank, Catalano, Jennifer G., Demichelis, Francesca, Fostel, Jennifer, Fuscoe, James C., Ge, Weigong, Han, Jing, Harris, Stephen C., Johnson, Charles D., Jurman, Giuseppe, Kahlert, Yvonne, Li, Zhiguang, Liu, Jie, Liu, Zhichao, Madera, Manuel, Ning, Baitang, Peng, Xuejun, Campbell, Gregory, Chen, Weijie, Gallas, Brandon D., Wang, May D., Bitter, Hans, Brors, Benedikt, Bylesjo, Max, Cheng, Jie, Cheng, Jing, Davison, Timothy S., Delorenzi, Mauro, Deng, Youping, Dopazo, Joaquin, Juraeva, Dilafruz, Lambert, Christophe G., Pennello, Gene A., Philip, Reena, Popovici, Vlad, Thodima, Venkata, Trygg, Johan, Vishnuvajjala, Lakshmi, Deng, Xutao, Eils, Roland, Khuder, Sadik A., Martinez-Murillo, Francisco, Moffitt, Richard A., Parry, R Mitchell, Peterson, Ron L., Jones, Wendell D., Devanarayan, Viswanath, Dorff, Kevin C., Fan, Jianqing, Fan, Shicai, Fan, Xiaohui, Gonzaludo, Nina, Hess, Kenneth R., Huan, Jun, Li, Yanen, Wu, Jianping, Zhang, Liang, Zhang, Xuegong, Zhu, Sheng, Cheng, Yiyu, Dosymbekov, Damir, Feng, Yang, Huang, Jianping, Jiang, Rui, Kohl, Matthias, Li, Shao, Liu, Ying, Meng, Lu, Mukherjee, Piali, Parker, Joel, Campagne, Fabien, Irizarry, Rafael A., Liu, Guozhen, Lobenhofer, Edward K., Luo, Wen, McCall, Matthew N., Nikolsky, Yuri, Price, Nathan D., Scherer, Andreas, Shi, Weiwei, Sung, Jaeyun, Wu, Yichao, Brennan, Richard J., Gatto, Laurent, Li, Jianying, Nikolskaya, Tatiana, Walker, Stephen J., Shi, Tieliu, Xie, Qian, Yousef, Waleed A., Zhong, Sheng, Lucas, Anne Bergstrom, Buness, Andreas, Chang, Chang, Cui, Jian, Fulmer-Smentek, Stephanie, Goldstein, Darlene R., Lee, Li, Su, Zhenqiang, Fang, Hong, Qian, Feng, Arasappan, Dhivya, Chen, Rong, Guo, Li, Halbert, Donald N., Hatzis, Christos, Herman, Damir, Li, Menglong, Meehan, Joseph, Chu, Tzu-Ming, Li, Li, Bao, Wenjun, Czika, Wendy, Jensen, Roderick V., Li, Quan-Zhen, Medina, Ignacio, Miclaus, Kelci, Montaner, David, Mulligan, George J., Neville, Padraic, Goodsaid, Federico M., Wang, Sue Jane, Page, Grier P., Pusztai, Lajos

Nature Biotechnology[1087-0156], Published 2010, Volume 28, Issue 8, Pages 827-838

收录情况： WOS

WOS核心合集引用:336 影响因子: 43.113 找找相关文章 PlumX Metrics

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57.Predicting the fate of microRNA target genes based on sequence features

Pei, YF, Wang, X, Zhang, XG

JOURNAL OF THEORETICAL BIOLOGY[0022-5193], Published 2009, Volume 261, Issue 1, Pages 17-22

收录情况： WOS

WOS核心合集引用:4 影响因子: 2.049 找找相关文章 PlumX Metrics

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58.A Genome-wide Association Study of Hypertension and Blood Pressure in Chinese Population

Zhang, Y, Gao, PJ, Zhang, XG, Huang, W, Zhu, DL

CIRCULATION[0009-7322], Published 2009, Volume 120, Issue 18, Pages S555-S555

收录情况： WOS

WOS核心合集引用:3 影响因子: 17.202 找找相关文章

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59.Gene-set analysis identifies master transcription factors in developmental courses

Liu, Y, Jiang, B, Zhang, XG

GENOMICS[0888-7543], Published 2009, Volume 94, Issue 1, Pages 1-10

收录情况： WOS

WOS核心合集引用:7 影响因子: 2.386 找找相关文章 PlumX Metrics

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60.CpG island methylation pattern in different human tissues and its correlation with gene expression

Fan, SC, Zhang, XG

BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS[0006-291X], Published 2009, Volume 383, Issue 4, Pages 421-425

收录情况： WOS

WOS核心合集引用:57 影响因子: 2.371 找找相关文章 PlumX Metrics

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61.Multi-stage analysis of gene expression and transcription regulation in C57/B6 mouse liver development

Li, TT, Huang, J, Jiang, Y, Zeng, Y, He, FC, Zhang, MQ, Han, ZG, Zhang, XG

GENOMICS[0888-7543], Published 2009, Volume 93, Issue 3, Pages 235-242

收录情况： WOS

WOS核心合集引用:30 影响因子: 2.386 找找相关文章 PlumX Metrics

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62.Progress of Bioinformatics Study in DNA Methylation

Fan, SC, Zhang, XG

PROGRESS IN BIOCHEMISTRY AND BIOPHYSICS[1000-3282], Published 2009, Volume 36, Issue 2, Pages 143-150

收录情况： WOS SCOPUS

WOS核心合集引用:3 影响因子: 0.224 找找相关文章 PlumX Metrics

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63.The Seventh Asia Pacific Bioinformatics Conference (APBC2009) Introduction

Zhang, MQ, Waterman, MS, Zhang, XG

BMC BIOINFORMATICS[1471-2105], Published 2009, Volume 10,

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影响因子: 2.435 找找相关文章 PlumX Metrics

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64.An overview of hepatocellular carcinoma study by omics-based methods

Pei, YF, Zhang, T, Renault, V, Zhang, XG

ACTA BIOCHIMICA ET BIOPHYSICA SINICA[1672-9145], Published 2009, Volume 41, Issue 1, Pages 1-15

收录情况： WOS SCOPUS

WOS核心合集引用:33 影响因子: 2.124 找找相关文章 PlumX Metrics

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65.Interaction between variants of two glycosyltransferase genes in IgA nephropathy

Zhu, Li, Li, Guisen, Lv, Jicheng, Ding, Jiaxiang, Yu, Lei, Zhao, Minghui, Zhang, Hong, Wang, Haiyan, Tang, Wanwan, Li, Yanda, Zhang, Xuegong, Shen, Yan

Kidney International[0085-2538], Published 2009, Volume 76, Issue 2, Pages 190-198

收录情况： WOS SCOPUS

WOS核心合集引用:14 影响因子: 7.683 找找相关文章 PlumX Metrics

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66.Pattern recognition methods in microarray based oncology study

Lu, Xuesong, Zhang, Xuegong

Frontiers of Electrical and Electronic Engineering in China[1673-3460], Published 2009, Volume 4, Issue 3, Pages 243-250

收录情况： SCOPUS

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67.DNA甲基化的生物信息学研究进展

凡时财,张学工

生物化学与生物物理进展[1000-3282], Published 2009, Issue 02, Pages 16-23

收录情况： CNKI

影响因子: 0.224 找找相关文章

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68.A comparative study of ensemble learning approaches in the classification of breast cancer metastasis

Zhang, Wangshu, Zeng, Feng, Wu, Xuebing, Zhang, Xuegong, Jiang, Rui

Proceedings - 2009 International Joint Conference on Bioinformatics, Systems Biology and Intelligent Computing, IJCBS 2009, Published 2009, Pages 242-245

收录情况： WOS SCOPUS

WOS核心合集引用:3 找找相关文章 PlumX Metrics

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69.Histone methylation marks play important roles in predicting the methylation status of CpG islands

Fan, SC, Zhang, MQ, Zhang, XG

BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS[0006-291X], Published 2008, Volume 374, Issue 3, Pages 559-564

收录情况： WOS

WOS核心合集引用:20 影响因子: 2.371 找找相关文章 PlumX Metrics

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70.Complicated evolutionary patterns of microRNAs in vertebrates

Wang, XW, Zhang, XG, Li, YD

SCIENCE IN CHINA SERIES C-LIFE SCIENCES[1006-9305], Published 2008, Volume 51, Issue 6, Pages 552-559

收录情况： WOS SCOPUS

WOS核心合集引用:2 找找相关文章 PlumX Metrics

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71.Functional importance of different patterns of correlation between adjacent cassette exons in human and mouse

Peng, T, Xue, CH, Bi, JN, Li, TT, Wang, XW, Zhang, XG, Li, YD

BMC GENOMICS[1471-2164], Published 2008, Volume 9,

收录情况： WOS SCOPUS

WOS核心合集引用:3 影响因子: 3.867 找找相关文章 PlumX Metrics

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72.Predicting features of breast cancer with gene expression patterns

Lu, XS, Lu, X, Wang, ZCG, Iglehart, JD, Zhang, XG, Richardson, AL

BREAST CANCER RESEARCH AND TREATMENT[0167-6806], Published 2008, Volume 108, Issue 2, Pages 191-201

收录情况： WOS SCOPUS

WOS核心合集引用:114 影响因子: 4.085 找找相关文章 PlumX Metrics

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73.Estimating the confidence interval for prediction errors of support vector machine classifiers

Jiang, B, Zhang, XG, Cai, TX

JOURNAL OF MACHINE LEARNING RESEARCH[1532-4435], Published 2008, Volume 9, Pages 521-540

收录情况： WOS SCOPUS

WOS核心合集引用:18 影响因子: 2.45 找找相关文章

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74.Prediction of kinase-specific phosphorylation sites with sequence features by a log-odds ratio approach

Li, TT, Li, F, Zhang, XG

PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS[0887-3585], Published 2008, Volume 70, Issue 2, Pages 404-414

收录情况： WOS SCOPUS

WOS核心合集引用:24 影响因子: 2.499 找找相关文章 PlumX Metrics

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75.Multiobjective Fuzzy Biclustering in Microarray Data: Method and a New Performance Measure

Maulik, U, Mukhopadhyay, A, Bandyopadhyay, S, Zhang, MQ, Zhang, X

2008 IEEE CONGRESS ON EVOLUTIONARY COMPUTATION, VOLS 1-8, Published 2008, Pages 1536-1543

收录情况： WOS SCOPUS

WOS核心合集引用:4 找找相关文章 PlumX Metrics

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76.脊椎动物中微小RNA进化模式研究

汪小我,张学工,李衍达

中国科学(C辑:生命科学)[1006-9259], Published 2008, Issue 04, Pages 48-55

收录情况： CNKI

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77.转录因子结合位点的计算分析方法

李婷婷,蒋博,汪小我,张学工

生物物理学报[1000-6737], Published 2008, Issue 05, Pages 12-25

收录情况： CNKI

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78.Putative Zinc Finger Protein Binding Sites Are Over-Represented in the Boundaries of Methylation-Resistant CpG Islands in the Human Genome

Fan, SC, Fang, F, Zhang, XG, Zhang, MQ

PLOS ONE[1932-6203], Published 2007, Volume 2, Issue 11,

收录情况： WOS SCOPUS

WOS核心合集引用:12 影响因子: 3.057 找找相关文章 PlumX Metrics

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79.Identifications of conserved 7-mers in 3'-UTRs and microRNAs in Drosophila

Gu, J, Fu, H, Zhang, X, Li, Y

BMC BIOINFORMATICS[1471-2105], Published 2007, Volume 8,

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WOS核心合集引用:11 影响因子: 2.435 找找相关文章 PlumX Metrics

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80.OSCAR: One-class SVM for accurate recognition of cis-elements

Jiang, B, Zhang, MQ, Zhang, XG

BIOINFORMATICS[1367-4803], Published 2007, Volume 23, Issue 21, Pages 2823-2828

收录情况： WOS SCOPUS

WOS核心合集引用:11 影响因子: 5.766 找找相关文章 PlumX Metrics

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81.Discovering multiple transcripts of human hepatocytes using massively parallel signature sequencing (MPSS)

Huang, J, Hao, P, Zhang, YL, Deng, FX, Deng, Q, Hong, Y, Wang, XW, Wang, Y, Li, TT, Zhang, XG, Li, YX, Yang, PY, Wang, HY, Han, ZG

BMC GENOMICS[1471-2164], Published 2007, Volume 8,

收录情况： WOS SCOPUS

WOS核心合集引用:8 影响因子: 3.867 找找相关文章 PlumX Metrics

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82.Computing exact P-values for DNA motifs

Zhang, J, Jiang, B, Li, M, Tromp, J, Zhang, XG, Zhang, MQ

BIOINFORMATICS[1367-4803], Published 2007, Volume 23, Issue 5, Pages 531-537

收录情况： WOS SCOPUS

WOS核心合集引用:21 影响因子: 5.766 找找相关文章 PlumX Metrics

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83.Neighbor number, valley seeking and clustering

Zhang, CL, Zhang, XG, Zhang, MQ, Li, YD

PATTERN RECOGNITION LETTERS[0167-8655], Published 2007, Volume 28, Issue 2, Pages 173-180

收录情况： WOS SCOPUS

WOS核心合集引用:11 影响因子: 1.586 找找相关文章 PlumX Metrics

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84.Prediction of kinase-specific phosphorylation sites by one-class SVMs

Li, TT, Fu, H, Zhang, XG

2007 IEEE INTERNATIONAL CONFERENCE ON BIOINFORMATICS AND BIOMEDICINE, PROCEEDINGS[2156-1125], Published 2007, Pages 217-222

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85.Understanding ZHENG in traditional Chinese medicine in the context of neuro-endocrine-immune network

Li, Shao, Zhang, Zhongqi, Wu, Lijiang, Zhang, Xuegong, Li, Yanda, Wang, Yongyan

IET Systems Biology[1751-8849], Published 2007, Volume 1, Issue 1, Pages 51-60

收录情况： SCOPUS

影响因子: 0.764 找找相关文章 PlumX Metrics

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86.Pattern recognition in mining high-throughput genomics/proteomics data: The new challenges in old questions

Zhang, Xuegong

Proceedings - International Conference on Computing: Theory and Applications, ICCTA 2007, Published 2007, Pages 242

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87.Integrative data mining in systems biology: from text to network mining

Peng, Yonghong, Zhang, Xuegong

Artificial Intelligence in Medicine[0933-3657], Published 2007, Volume 41, Issue 2, Pages 83-86

收录情况： SCOPUS

影响因子: 2.142 找找相关文章 PlumX Metrics

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88.Tuning SVM parameters for classifying geographical origins of Chinese medical herbs

Xu, JH, Zhang, XG, Sun, SQ

INTERNATIONAL JOURNAL OF WAVELETS MULTIRESOLUTION AND INFORMATION PROCESSING[0219-6913], Published 2006, Volume 4, Issue 4, Pages 643-657

收录情况： WOS

WOS核心合集引用:2 影响因子: 0.392 找找相关文章 PlumX Metrics

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89.A new method for detecting human recombination hotspots and its applications to the HapMap ENCODE data

Li, J, Zhang, MQ, Zhang, XG

AMERICAN JOURNAL OF HUMAN GENETICS[0002-9297], Published 2006, Volume 79, Issue 4, Pages 628-639

收录情况： WOS SCOPUS

WOS核心合集引用:14 影响因子: 10.794 找找相关文章 PlumX Metrics

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90.Primary transcripts and expressions of mammal intergenic microRNAs detected by mapping ESTs to their flanking sequences

Gu, J, He, T, Pei, YF, Li, F, Wang, XW, Zhang, J, Zhang, XG, Li, YD

MAMMALIAN GENOME[0938-8990], Published 2006, Volume 17, Issue 10, Pages 1033-1041

收录情况： WOS SCOPUS

WOS核心合集引用:25 影响因子: 2.078 找找相关文章 PlumX Metrics

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91.Predicting methylation status of CpG islands in the human brain

Fang, F, Fan, SC, Zhang, XG, Zhang, MQ

BIOINFORMATICS[1367-4803], Published 2006, Volume 22, Issue 18, Pages 2204-2209

收录情况： WOS SCOPUS

WOS核心合集引用:55 影响因子: 5.766 找找相关文章 PlumX Metrics

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92.The effect of GeneChip gene definitions on the microarray study of cancers

Lu, XS, Zhang, XG

BIOESSAYS[0265-9247], Published 2006, Volume 28, Issue 7, Pages 739-746

收录情况： WOS SCOPUS

WOS核心合集引用:16 影响因子: 4.725 找找相关文章 PlumX Metrics

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93.Significance of gene ranking for classification of microarray samples

Zhang, CL, Lu, XS, Zhang, XG

IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS[1545-5963], Published 2006, Volume 3, Issue 3, Pages 312-320

收录情况： WOS SCOPUS

WOS核心合集引用:33 影响因子: 1.609 找找相关文章

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94.Symptom combinations associated with outcome and therapeutic effects in a cohort of cases with SARS

Li, S, Wang, RQ, Zhang, YL, Zhang, XG, Layon, AJ, Li, YD, Chen, MZ

AMERICAN JOURNAL OF CHINESE MEDICINE[0192-415X], Published 2006, Volume 34, Issue 6, Pages 937-947

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WOS核心合集引用:10 影响因子: 2.959 找找相关文章 PlumX Metrics

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95.Nonlinear kernel forms of classical linear algorithms

Xu, Jianhua, Zhang, Xuegong

Kongzhi yu Juece/Control and Decision[1001-0920], Published 2006, Volume 21, Issue 1, Pages -6-12

收录情况： SCOPUS

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96.Determination of geographical origins of Chinese medical herbs by NIR and pattern recognition

Liu, ShuHua, Zhang, Xuegong, Zhou, Qun, Sun, Suqin

Guang Pu Xue Yu Guang Pu Fen Xi/Spectroscopy and Spectral Analysis[1000-0593], Published 2006, Volume 26, Issue 4, Pages 629-632

收录情况： WOS SCOPUS

WOS核心合集引用:19 影响因子: 0.275 找找相关文章

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97.经典线性算法的非线性核形式

许建华,张学工

控制与决策[1001-0920], Published 2006, Issue 01, Pages 3-8+14

收录情况： CNKI

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98.混合法VSP共炮记录叠前深度偏移

熊高君,庄志蕾,张树林,张学工,贺振华

天然气工业[1000-0976], Published 2006, Issue 02, Pages 14+86-87

收录情况： CNKI

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99.近红外漫反射光谱法和模式识别技术鉴别中药材产地

刘沭华,张学工,周群,孙素琴

光谱学与光谱分析[1000-0593], Published 2006, Issue 04, Pages 39-42

收录情况： CNKI

影响因子: 0.275 找找相关文章

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100.Classification of real and pseudo microRNA precursors using local structure-sequence features and support vector machine

Xue, CH, Li, F, He, T, Liu, GP, Li, YD, Zhang, XG

BMC BIOINFORMATICS[1471-2105], Published 2005, Volume 6,

收录情况： WOS SCOPUS

WOS核心合集引用:215 影响因子: 2.435 找找相关文章 PlumX Metrics