俞声 副教授
研究方向：医学信息学、医学自然语言处理与文本分析、电子病历数据分析、知识图谱建设、临床决策支持。
地址：清华大学伟清楼209-B室
电话：
邮箱：syu@tsinghua.edu.cn





Background乔治华盛顿大学系统工程（运筹学）博士
哈佛大学博士后（2012-2015）
布莱根妇女医院研究员（2012-2015）
清华大学统计学研究中心助理教授（2015-2018）
清华大学统计学研究中心副教授（2018-）
清华大学数据科学研究院RONG教授（2018-）
TEACHING《数据科学导论》
《数据挖掘中的统计方法》
《统计学习导论》
《统计计算》
PATENTS搜索引擎专利《信息检索方法和装置》，根据病历中语意精确寻找符合查询语意的电子病历。专利号：ZL 0.3。发明人：俞声。
PublicationsYichi Zhang*, Tianrun Cai*, Sheng Yu*, Kelly Cho, Chuan Hong, Jiehuan Sun, Jie Huang, Yuk-Lam Ho, Ashwin Ananthakrishnan, Zongqi Xia, Stanley Shaw, Vivian Gainer, Victor Castro, Nicholas Link, Jacqueline Honerlaw, Selena Huang, David Gagnon, Elizabeth Karlson, Robert Plenge, Peter Szolovits, Guergana Savova, Susanne Churchill, Christopher O'Donnell, Shawn Murphy, J Michael Gaziano, Isaac Kohane, Tianxi Cai*, and Katherine Liao*. Methods for High-throughput Phenotyping with Electronic Medical Record Data Using a Common Semi-supervised Approach (PheCAP). Nature Protocols (2019). *contributed equally. Impact factor 12.423.
Katherine P. Liao#, Jiehuan Sun#, Tianrun A. Cai, Nicholas Link, Chuan Hong, Jie Huang, Jennifer E. Huffman, Jessica Gronsbell, Yichi Zhang, Yuk-Lam Ho, Victor Castro, Vivian Gainer, Shawn N. Murphy, Christopher J. O’Donnell, J. Michael Gaziano, Kelly Cho, Peter Szolovits, Isaac S. Kohane, MD, Sheng Yu*, Tianxi Cai*. High-throughput Multimodal Automated Phenotyping (MAP) with Application to PheWAS. Journal of the American Medical Informatics Association (2019). #contributed equally, *contributed equally. 医学信息学顶刊, impact factor 4.270.
Yucong Lin, Cheng Ma, Daiqi Gao, Zihao Fan, Zijie Cheng, Zheyu Wang, Sheng Yu*. Long distance entity relation extraction with article structure embedding and applied to mining medical knowledge. IEEE ICHI (2019).
Anil Can, Pui Man Rosalind Lai, Victor Castro, Sheng Yu, Dmitriy Dligach, Sean Finan, Vivian Gainer, Nancy Shadick, guergana savova, Shawn Murphy, Tianxi Cai, Scott Weiss, and Rose Du*. Decreased Total Iron Binding Capacity May Correlate with Ruptured Intracranial Aneurysms. Scientific Reports (2019). Impact factor 4.011.
Wenxin Ning, Stephanie Chan, Andrew Beam, Ming Yu, Alon Geva, Katherine P Liao, Mary Mullen, Kenneth D Mandl, Isaac S Kohane, Tianxi Cai, Sheng Yu*. Feature Extraction for Phenotyping from Semantic and Knowledge Resources. Journal of Biomedical Informatics (2019), 91:103122; Impact factor 2.882.
Jiaqi Guan, Runzhe Li, Sheng Yu, Xuegong Zhang*. Generation of Synthetic Electronic Medical Record Text.?In 2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM), pp. 374-380. IEEE (2018).
Jessica Gronsbell, Jessica Minnier, Sheng Yu, Katherine Liao, Tianxi Cai*. Automated Feature Selection of Predictors in Electronic Medical Records Data. Biometrics (2018); Impact factor 1.524.
Anil Can, Victor Castro, Dmitriy Dligach, Sean Finan, Sheng Yu, Vivian Gainer, Nancy Shadick, Guergana Savova, Shawn Murphy, Tianxi Cai, Scott Weiss, and Rose Du*. Elevated International Normalized Ratio is Associated with Ruptured Aneurysms. Stroke (2018); Impact factor 6.032.
Anil Can, Robert F. Rudy, BS, M. Castro, Sheng Yu, Dmitriy Dligach, Sean Finan, Vivian Gainer, Nancy A. Shadick, Guergana Savova, Shawn Murphy, Tianxi Cai, Scott T. Weiss, Rose Du*. Association between Aspirin Dose and Subarachnoid Hemorrhage from Saccular Aneurysms: A Case-Control Study; Neurology (2018); Impact factor 8.320.
Anil Can, Victor M. Castro, Dmitriy Dligach, Sean Finan, Sheng Yu, Vivian Gainer, Nancy A. Shadick, Guergana Savova, Shawn Murphy, Tianxi Cai, Scott T. Weiss, Rose Du*. Low Serum Calcium and Magnesium Levels and Rupture of Intracranial Aneurysms; Stroke (2018); Impact factor 6.032.
Jennifer A. Sinnott*, Fiona Cai, Sheng Yu, Boris P. Hejblum, Chuan Hong, Isaac S. Kohane, Katherine P. Liao. PheProb: Probabilistic Phenotyping Using Diagnosis Codes to Improve Power for Genetic Association Studies. Journal of the American Medical Informatics Association (2018); 医学信息学顶刊, impact factor 4.270.
Jian Zhang, Anil Can, Srinivasan Mukundan Jr., Michael Steigner, Victor M. Castro, Dmitriy Dligach, Sean Finan, Sheng Yu, Vivian Gainer, Nancy A. Shadick, Guergana Savova, Shawn Murphy, Tianxi Cai, Zhong Wang, Scott T. Weiss, Rose Du*. Morphological Variables Associated with Ruptured Middle Cerebral Artery Aneurysms. Neurosurgery (2018); impact factor 4.889.
Thomas H. McCoy#, Sheng Yu#, Kamber L. Hart, Victor M. Castro, Hannah E. Brown, James N. Rosenquist, Alysa E. Doyle, Pieter J. Vuijk, Tianxi Cai*, Roy H. Perlis*. High Throughput Phenotyping for Dimensional Psychopathology in Electronic Health Records. Biological Psychiatry (2018); DOI: 10.1016/j.biopsych.2018.01.011; #contributed equally, 精神病学顶刊 impact factor 11.412. https://www.sciencedaily.com/releases/2018/02/**6.htm
Thomas H. McCoy, Victor M. Castro, Kamber L. Hart, Amelia M. Pellegrini, Sheng Yu, Tianxi Cai, Roy H. Perlis*. Genome-wide Association Study of Dimensional Psychopathology Using Electronic Health Records. Biological Psychiatry (2018); DOI: 10.1016/j.biopsych.2017.12.004; 精神病学顶刊 impact factor 11.412.
Anil Can, Victor Castro, Dmitriy Dligach, Sean Finan, Sheng Yu, Vivian Gainer, Nancy Shadick, Guergana Savova, Shawn Murphy, Tianxi Cai, scott weiss, and Rose Du*. Lipid-Lowering Agents and High HDL are Inversely Associated with Intracranial Aneurysm Rupture; Stroke (2018); Impact factor 6.032.
Anil Can, Victor M. Castro, Yildirim H. Ozdemir, Sarajune Dagen, Dmitriy Dligach, Sean Finan, Sheng Yu, Vivian Gainer, Nancy A. Shadick, Shawn Murphy, Tianxi Cai, Guergana Savova, Scott T. Weiss, Rose Du*; Alcohol Consumption and Aneurysmal Subarachnoid Hemorrhage; Translational Stroke Research (2018), 9(1):13-19; Impact factor 4.503.
Anil Can, Victor M. Castro, Sheng Yu, Dmitriy Dligach, Sean Finan, Vivian Gainer, Nancy A. Shadick, Guergana Savova, Shawn Murphy, Tianxi Cai, Guergana Savova, Scott T. Weiss, Rose Du*; Antihyperglycemic Agents are Inversely Associated with Intracranial Aneurysm Rupture; Stroke (2018), 49(1):34-39; doi: 10.1161/STROKEAHA.117.019249 ; Impact factor 6.032.
Sheng Yu*, Yumeng Ma, Jessica Gronsbell, Tianrun Cai, Ashwin N. Ananthakrishnan, Vivian S. Gainer, Susanne E. Churchill, Peter Szolovits, Shawn N. Murphy, Isaac S. Kohane, Katherine P. Liao, Tianxi Cai. Enabling Phenotypic Big Data with PheNorm; Journal of the American Medical Informatics Association (2018), 25(1，数据科学特刊):54-60; doi: 10.1093/jamia/ocx111; 医学信息学顶刊, impact factor 4.270. 获选 2019 IMIA Yearbook 知识表示与管理类最佳论文。
Anil Can, Victor M. Castro, Yildirim H. Ozdemir, Sarajune Dagen, Dmitriy Dligach, Sean Finan, Sheng Yu, Vivian Gainer, Nancy A. Shadick, Guergana Savova, Shawn Murphy, Tianxi Cai, Guergana Savova, Scott T. Weiss, Rose Du*; Heroin Use is Associated with Ruptured Saccular Aneurysms; Translational Stroke Research (2017); doi: 10.1007/s12975-017-0582-y; Impact factor 4.503.
Anil Can, Victor Castro, Yildirim H Ozdemir, Sarajune Dagen, Sheng Yu, Dmitriy Dligach, Sean Finan, Vivian S Gainer, Nancy Shadick, Shawn Murphy, Tianxi Cai, Guergana Savova, Ruben Dammers, Scott T Weiss, and Rose Du*; Association of Intracranial Aneurysm Rupture with Smoking Duration, Intensity, and Cessation; Neurology?(2017), 10-1212; Impact factor 8.320.
Sheng Yu*, Abhishek Chakrabortty, Katherine P. Liao, Tianrun Cai, Ashwin N. Ananthakrishnan, Vivian S. Gainer, Susanne E. Churchill, Peter Szolovits, Shawn N. Murphy, Isaac S. Kohane, Tianxi Cai. Surrogate-assisted Feature Extraction for High-throughput Phenotyping; Journal of the American Medical Informatics Association (2017), 24 (e1): e143-e149; doi: 10.1093/jamia/ocw135; 医学信息学顶刊, impact factor 4.270.
Victor M. Castro, Dmitriy Dligach, Sean Finan, Sheng Yu, Anil Can, Muhammad Abd-El-Barr, Vivian Gainer, Nancy A. Shadick, Shawn Murphy, Tianxi Cai, Guergana Savova, Scott T. Weiss, Rose Du*; Large-scale identification of subjects with cerebral aneurysms using natural language processing; Neurology (2017): 88(2), 164-168; Impact factor 8.320.
Florence H. Yong, Lu Tian*, Sheng Yu, Tianxi Cai and L.J. Wei. Optimal stratification in outcome prediction using baseline information; Biometrika, 103.4 (2016): 817-828; Impact factor 1.448.
Tianrun Cai, Andreas A. Giannopoulos, Sheng Yu, Tatiana Kelil,Beth Ripley, Kanako K. Kumamaru, Frank J. Rybicki, and Dimitrios Mitsouras*. Natural Language Processing Technologies in Radiology Research and Clinical Applications. RadioGraphics (2016), 36, no. 1: 176-191. Impact factor: 3.427.
Sheng Yu*, Katherine P. Liao, Stanley Y. Shaw, Vivian S. Gainer, Susanne E. Churchill, Peter Szolovits, Shawn N. Murphy, Isaac Kohane, and Tianxi Cai. Toward High-throughput Phenotyping: Unbiased Automated Feature Extraction and Selection from Knowledge Sources; Journal of the American Medical Informatics Association (2015), 22(5):993-1000; doi: 10.1093/jamia/ocv034; 医学信息学顶刊, impact factor 4.270; 获选 EDITOR'S CHOICE.
Castro, V., Shen, Y., Yu, S., Finan, S., Pau, C.T., Gainer, V., Keefe, C.C., Savova, G., Murphy, S.N., Cai, T. and Welt, C.K.*. Identification of subjects with polycystic ovary syndrome using electronic health records. Reproductive Biology and Endocrinology (2014), 13(1), p.116. Impact factor 2.226.
Sheng Yu*, Kanako K. Kumamaru, Elizabeth George, Ruth M. Dunne, Arash Bedayat, Matey Neykov, Andetta R. Hunsaker, Karin E. Dill, Tianxi Cai, and Frank J. Rybicki. Classification of CT Pulmonary Angiography Reports By Presence, Chronicity, and Location of Pulmonary Embolism with Natural Language Processing; Journal of Biomedical Informatics (2014), 52: 386-393; Impact factor 2.882.
Vishesh Kumar*, Katherine Liao, Su-Chun Cheng, Sheng Yu, Uri Kartoun, Ari Brettman, Vivian Gainer, Andrew Cagan, Shawn Murphy, Guergana Savova, Pei Chen, Peter Szolovits, Zongqi Xia, Elizabeth Karlson, Robert Plenge, Ashwin Ananthakrishnan, Susanne Churchill, Tianxi Cai, Isaac Kohane, Stanley Shaw. Natural Language Processing Improves Phenotypic Accuracy in an Electronic Medical Record Cohort of Type 2 Diabetes and Cardiovascular Disease; Journal of the American College of Cardiology (2014), 63(12):A1359; Impact factor 19.896.
Sheng Yu* and Enrique Campos-Ná?ez. Adaptive Convex Enveloping for Multidimensional Stochastic Dynamic Optimization; 62nd IIE Annual Conference and Expo. Proceedings. 2012. Best Paper of Operations Research.