基本信息

苏晓泉男中国科学院青岛生物能源与过程研究所 副研究员/硕导
电子邮件： suxq@qibebt.ac.cn
通信地址： 山东省青岛市崂山区松岭路189号
邮政编码： 266101


研究领域生物信息学，微生物组学，高性能计算

招生信息欢迎具有计算机科学、统计学和生物信息学背景的考生报考！


招生专业071021-生物信息学
071023-计算生物学
071005-微生物学

招生方向生物信息学
高性能计算
微生物组学


教育背景2015-09--2018-12中国科学院青岛生物能源与过程研究所理学博士
2010-01--2011-05纽约州立大学石溪分校理学硕士
2005-09--2009-06武汉大学学士


工作经历
工作简历2017-01~现在,中国科学院青岛生物能源与过程研究所,副研究员
2016-08~2016-11,加州大学圣地亚哥分校,国家公派访问
2014-06~2014-07,香港城市大学,高级研究助理
2011-05~2016-12,中国科学院青岛生物能源与过程研究所,助理研究员


出版信息
发表论文（1）RNA-QC-chain: comprehensive and fast quality control for RNA-Seq data,RNA-QC-chain: comprehensive and fast quality control for RNA-Seq data,BMC Genomics,2018,第1作者
（2）Identifying and Predicting Novelty in Microbiome Studies,Identifying and Predicting Novelty in Microbiome Studies,mBio,2018,通讯作者
（3）Parallel-META 3: Comprehensive taxonomical and functional analysis platform for efficient comparison of microbial communities,Parallel-META 3: Comprehensive taxonomical and functional analysis platform for efficient comparison of microbial communities,Scientific Reports,2017,通讯作者
（4）GPU-Meta-Storms: computing the structure similarities among massive amount of microbial community samples using GPU,GPU-Meta-Storms: computing the structure similarities among massive amount of microbial community samples using GPU,Bioinformatics,2014,第1作者
（5）Parallel-META 2.0: Enhanced Metagenomic Data Analysis with Functional Annotation, High Performance Computing and Advanced Visualization,Parallel-META 2.0: Enhanced Metagenomic Data Analysis with Functional Annotation, High Performance Computing and Advanced Visualization,PLOS ONE,2014,第1作者
（6）Biological ingredient analysis of traditional Chinese medicine preparation based on high-throughput sequencing: the story for Liuwei Dihuang Wan,Biological ingredient analysis of traditional Chinese medicine preparation based on high-throughput sequencing: the story for Liuwei Dihuang Wan,Scientific Reports,2014,第1作者
（7）Rapid comparison and correlation analysis among massive number of microbial community samples based on MDV data model,Rapid comparison and correlation analysis among massive number of microbial community samples based on MDV data model,Scientific Reports,2014,第1作者
（8）Assessment of quality control approaches for metagenomic data analysis,Assessment of quality control approaches for metagenomic data analysis,Scientific Reports,2014,第1作者
（9）Meta-Storms: efficient search for similar microbial communities based on a novel indexing scheme and similarity score for metagenomic data,Meta-Storms: efficient search for similar microbial communities based on a novel indexing scheme and similarity score for metagenomic data,Bioinformatics,2012,第1作者
（10）Parallel-META: efficient metagenomic data analysis based on high-performance computation,Parallel-META: efficient metagenomic data analysis based on high-performance computation,BMC Systems Biology,2012,第1作者

发表著作

科研活动
科研项目（ 1 ） 基于GPU-CPU混合并行计算的微生物组大数据索引与搜索方法学研究, 主持,国家级,2018-01--2021-12
（ 2 ） 微生物组功能大数据搜索引擎, 主持,部委级,2017-10--2019-09
（ 3 ） 基于功能的元基因组大数据搜索方法研究, 主持,省级,2017-09--2019-08